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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 34.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 7.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 20.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 122.2
Min RPKM: 2.4
Std RPKM: 27.3
Median RPKM: 29.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
122.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
120.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
108.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
107.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
105.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
101.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
99.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
98.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
94.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
84.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
84.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
83.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
82.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
81.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
80.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
80.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
79.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
79.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
79.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
78.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
78.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
78.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
76.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
76.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
73.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
72.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
72.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
72.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
70.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
69.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
68.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
68.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
67.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
66.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
65.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
64.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
63.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
63.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
63.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
63.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
62.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
62.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
60.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
59.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
59.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
57.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
57.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
57.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
56.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
55.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
55.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
55.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
54.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
53.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
53.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
53.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
50.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
49.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
49.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
49.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
49.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
48.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
48.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
47.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
46.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
45.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
45.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
45.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
45.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
45.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
44.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
44.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
44.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
43.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
43.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
43.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
43.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
42.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
41.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
41.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
40.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
39.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
39.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
38.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
38.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
38.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
38.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
38.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
37.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
36.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
36.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
36.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
35.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
34.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
34.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
34.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
33.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
33.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
32.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
32.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
31.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
30.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
30.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
30.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
29.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
29.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
29.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
29.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
29.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
28.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
28.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
27.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
27.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
27.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
27.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
27.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
27.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
26.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
26.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
26.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
25.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
24.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
24.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
24.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
24.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
23.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
23.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
22.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
22.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
21.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
21.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
21.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
20.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
20.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
20.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
19.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
19.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
19.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
18.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
18.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
18.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
17.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
17.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
17.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
16.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
16.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
16.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
15.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
15.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
15.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
15.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
15.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
14.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
14.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
14.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
14.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
14.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
13.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
13.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
12.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
12.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
12.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
12.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
12.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
11.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
10.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
10.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
10.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
10.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
9.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
8.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
8.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
8.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
8.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
8.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
8.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
7.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
7.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
7.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
7.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
7.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
7.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
7.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
7.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
7.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
7.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
7.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
7.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
6.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
6.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
6.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
6.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
6.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
6.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
5.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
5.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
5.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
5.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
5.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
5.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
5.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
4.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
4.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
4.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
4.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
4.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
4.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
4.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
3.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
3.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
3.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
3.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
3.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
2.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.