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RNA category is based on mRNA expression levels in the analyzed samples (RNA assay description). The categories include: tissue/cell line enriched, group enriched, tissue/cell line enhanced, expressed in all, mixed and not detected. RNA category is calculated separately for The Cancer Genome Atlas (TCGA) data from cancer tissues and internally generated Human Protein Atlas (HPA) data from normal tissues and cell lines.
TCGA (cancer tissue):
Expressed in all
HPA (cell line):
Cell line enhanced (REH)
HPA (normal tissue):
Expressed in all
Protein evidencei
Protein evidence scores are generated from several independent sources and are classified as evidence at i) protein level, ii) transcript level, iii) no evidence, or iv) not available.
Evidence at protein level
Protein expression normal tissuei
A summary of the overall protein expression pattern across the analyzed normal tissues. The summary is based on knowledge-based annotation.
"Estimation of protein expression could not be performed. View primary data." is shown for genes analyzed with a knowledge-based approach where available RNA-seq and gene/protein characterization data has been evaluated as not sufficient in combination with immunohistochemistry data to yield a reliable estimation of the protein expression profile.
Cytoplasmic and nuclear expression at variable levels in most cell types, expressed mainly in the brain and lymphoid tissue.
IMMUNOHISTOCHEMISTRY DATA RELIABILITY
Data reliability descriptioni
Standardized explanatory sentences with additional information required for full understanding of the knowledge-based expression profile.
Antibody staining mainly consistent with RNA expression data.
Reliability score - normal tissuesi
Reliability score (score description), divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in normal tissues and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein.
Kaplan-Meier plots for all cancers where high expression of this gene has significant (p<0.001) association with patient survival are shown in this summary. Whether the prognosis is favourable or unfavourable is indicated in brackets. Each Kaplan-Meier plot is clickable and redirects to a detailed page that includes individual expression and survival data for patients with the selected cancer.
RNA expression overview shows RNA-seq data from The Cancer Genome Atlas (TCGA).
TCGA dataseti
RNA-seq data in 17 cancer types are reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA). RNA cancer tissue category is calculated based on mRNA expression levels across all 17 cancer tissues and include: cancer tissue enriched, cancer group enriched, cancer tissue enhanced, expressed in all, mixed and not detected. To access cancer specific RNA and prognostic data, click on the cancer name. The cancer types are color-coded according to which type of normal organ the cancer originates from.
Antibody staining in 20 different cancers is summarized by a selection of four standard cancer tissue samples representative of the overall staining pattern. From left: colorectal cancer, breast cancer, prostate cancer and lung cancer. An additional fifth image can be added as a complement. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
For each cancer, color-coded bars indicate the percentage of patients (maximum 12 patients) with high and medium protein expression level. The cancer types are color-coded according to which type of normal organ the cancer originates from. Low or not detected protein expression results in a white bar. Mouse-over function shows details about expression level and normal tissue of origin. The images and annotations can be accessed by clicking on the cancer name or protein expression bar. If more than one antibody is analyzed, the tabs at the top of the staining summary section can be used to toggle between the different antibodies.
Moderate cytoplasmic and nuclear positivity was observed in most malignant tissues. A few cases of cervical cancers displayed strong positivity. Urothelial, renal, gastric, pancreatic and liver cancers were generally negative.
Malignant cells generally showed weak staining or were negative. A majority of colorectal cancers showed moderate cytoplasmic immunoreactivity.
Malignant cells were generally negative. Weak to moderate positivity was observed in a few cases of malignant lymphomas.
GENE INFORMATIONi
Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.
Gene name
PTK2B (HGNC Symbol)
Synonyms
CADTK, CAKB, FAK2, PTK, PYK2, RAFTK
Description
Protein tyrosine kinase 2 beta (HGNC Symbol)
Entrez gene summary
This gene encodes a cytoplasmic protein tyrosine kinase which is involved in calcium-induced regulation of ion channels and activation of the map kinase signaling pathway. The encoded protein may represent an important signaling intermediate between neuropeptide-activated receptors or neurotransmitters that increase calcium flux and the downstream signals that regulate neuronal activity. The encoded protein undergoes rapid tyrosine phosphorylation and activation in response to increases in the intracellular calcium concentration, nicotinic acetylcholine receptor activation, membrane depolarization, or protein kinase C activation. This protein has been shown to bind CRK-associated substrate, nephrocystin, GTPase regulator associated with FAK, and the SH2 domain of GRB2. The encoded protein is a member of the FAK subfamily of protein tyrosine kinases but lacks significant sequence similarity to kinases from other subfamilies. Four transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
The protein browser displays the antigen location on the target protein(s) and the features of the target protein. The tabs at the top of the protein view section can be used to switch between the different splice variants to which an antigen has been mapped.
At the top of the view, the position of the antigen (identified by the corresponding HPA identifier) is shown as a green bar. A yellow triangle on the bar indicates a <100% sequence identity to the protein target.
Under the antigens, the maximum percent sequence identity of the protein to all other proteins from other human genes is displayed, using a sliding window of 10 aa residues (HsID 10) or 50 aa residues (HsID 50). The region with the lowest possible identity is always selected for antigen design, with a maximum identity of 60% allowed for designing a single-target antigen (read more).
The curve in blue displays the predicted antigenicity i.e. the tendency for different regions of the protein to generate an immune response, with peak regions being predicted to be more antigenic.The curve shows average values based on a sliding window approach using an in-house propensity scale. (read more).
If a signal peptide is predicted by a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius (turquoise) and/or transmembrane regions (orange) are predicted by MDM, these are displayed.
Low complexity regions are shown in yellow and InterPro regions in green. Common (purple) and unique (grey) regions between different splice variants of the gene are also displayed (read more), and at the bottom of the protein view is the protein scale.
PTK2B-001
PTK2B-002
PTK2B-007
PTK2B-009
PTK2B-010
PTK2B-011
PTK2B-014
PTK2B-015
PTK2B-201
PROTEIN INFORMATIONi
The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.
The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.
The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.
The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Enzymes ENZYME proteins Transferases Kinases Tyr protein kinases Predicted intracellular proteins Plasma proteins Disease related genes Potential drug targets Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding] GO:0001525 [angiogenesis] GO:0001954 [positive regulation of cell-matrix adhesion] GO:0002040 [sprouting angiogenesis] GO:0002250 [adaptive immune response] GO:0002315 [marginal zone B cell differentiation] GO:0002376 [immune system process] GO:0002688 [regulation of leukocyte chemotaxis] GO:0004672 [protein kinase activity] GO:0004683 [calmodulin-dependent protein kinase activity] GO:0004713 [protein tyrosine kinase activity] GO:0004715 [non-membrane spanning protein tyrosine kinase activity] GO:0004871 [signal transducer activity] GO:0004972 [NMDA glutamate receptor activity] GO:0005102 [receptor binding] GO:0005515 [protein binding] GO:0005524 [ATP binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005856 [cytoskeleton] GO:0005886 [plasma membrane] GO:0005925 [focal adhesion] GO:0005938 [cell cortex] GO:0006461 [protein complex assembly] GO:0006468 [protein phosphorylation] GO:0006915 [apoptotic process] GO:0006950 [response to stress] GO:0006968 [cellular defense response] GO:0007165 [signal transduction] GO:0007166 [cell surface receptor signaling pathway] GO:0007172 [signal complex assembly] GO:0007173 [epidermal growth factor receptor signaling pathway] GO:0007229 [integrin-mediated signaling pathway] GO:0008284 [positive regulation of cell proliferation] GO:0008285 [negative regulation of cell proliferation] GO:0008360 [regulation of cell shape] GO:0010595 [positive regulation of endothelial cell migration] GO:0010758 [regulation of macrophage chemotaxis] GO:0010976 [positive regulation of neuron projection development] GO:0014069 [postsynaptic density] GO:0016020 [membrane] GO:0016301 [kinase activity] GO:0016310 [phosphorylation] GO:0016740 [transferase activity] GO:0017146 [NMDA selective glutamate receptor complex] GO:0018108 [peptidyl-tyrosine phosphorylation] GO:0030027 [lamellipodium] GO:0030054 [cell junction] GO:0030155 [regulation of cell adhesion] GO:0030334 [regulation of cell migration] GO:0030335 [positive regulation of cell migration] GO:0030425 [dendrite] GO:0030426 [growth cone] GO:0030500 [regulation of bone mineralization] GO:0030502 [negative regulation of bone mineralization] GO:0030838 [positive regulation of actin filament polymerization] GO:0031234 [extrinsic component of cytoplasmic side of plasma membrane] GO:0032960 [regulation of inositol trisphosphate biosynthetic process] GO:0033209 [tumor necrosis factor-mediated signaling pathway] GO:0035235 [ionotropic glutamate receptor signaling pathway] GO:0038083 [peptidyl-tyrosine autophosphorylation] GO:0042127 [regulation of cell proliferation] GO:0042976 [activation of Janus kinase activity] GO:0042995 [cell projection] GO:0043025 [neuronal cell body] GO:0043066 [negative regulation of apoptotic process] GO:0043267 [negative regulation of potassium ion transport] GO:0043524 [negative regulation of neuron apoptotic process] GO:0043552 [positive regulation of phosphatidylinositol 3-kinase activity] GO:0044297 [cell body] GO:0045087 [innate immune response] GO:0045453 [bone resorption] GO:0045638 [negative regulation of myeloid cell differentiation] GO:0045765 [regulation of angiogenesis] GO:0045860 [positive regulation of protein kinase activity] GO:0046330 [positive regulation of JNK cascade] GO:0046777 [protein autophosphorylation] GO:0048010 [vascular endothelial growth factor receptor signaling pathway] GO:0048471 [perinuclear region of cytoplasm] GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation] GO:0051279 [regulation of release of sequestered calcium ion into cytosol] GO:0051968 [positive regulation of synaptic transmission, glutamatergic] GO:0060291 [long-term synaptic potentiation] GO:0070098 [chemokine-mediated signaling pathway] GO:0070374 [positive regulation of ERK1 and ERK2 cascade] GO:0071300 [cellular response to retinoic acid] GO:0097440 [apical dendrite] GO:2000058 [regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process] GO:2000114 [regulation of establishment of cell polarity] GO:2000249 [regulation of actin cytoskeleton reorganization] GO:2000310 [regulation of NMDA receptor activity] GO:2000463 [positive regulation of excitatory postsynaptic potential] GO:2000538 [positive regulation of B cell chemotaxis]
Enzymes ENZYME proteins Transferases Kinases Tyr protein kinases Predicted intracellular proteins Plasma proteins Disease related genes Potential drug targets Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding] GO:0001525 [angiogenesis] GO:0001954 [positive regulation of cell-matrix adhesion] GO:0002040 [sprouting angiogenesis] GO:0002250 [adaptive immune response] GO:0002315 [marginal zone B cell differentiation] GO:0002376 [immune system process] GO:0002688 [regulation of leukocyte chemotaxis] GO:0004672 [protein kinase activity] GO:0004683 [calmodulin-dependent protein kinase activity] GO:0004713 [protein tyrosine kinase activity] GO:0004715 [non-membrane spanning protein tyrosine kinase activity] GO:0004871 [signal transducer activity] GO:0004972 [NMDA glutamate receptor activity] GO:0005102 [receptor binding] GO:0005515 [protein binding] GO:0005524 [ATP binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005856 [cytoskeleton] GO:0005886 [plasma membrane] GO:0005925 [focal adhesion] GO:0005938 [cell cortex] GO:0006461 [protein complex assembly] GO:0006468 [protein phosphorylation] GO:0006915 [apoptotic process] GO:0006950 [response to stress] GO:0006968 [cellular defense response] GO:0007165 [signal transduction] GO:0007166 [cell surface receptor signaling pathway] GO:0007172 [signal complex assembly] GO:0007173 [epidermal growth factor receptor signaling pathway] GO:0007229 [integrin-mediated signaling pathway] GO:0008284 [positive regulation of cell proliferation] GO:0008285 [negative regulation of cell proliferation] GO:0008360 [regulation of cell shape] GO:0010595 [positive regulation of endothelial cell migration] GO:0010758 [regulation of macrophage chemotaxis] GO:0010976 [positive regulation of neuron projection development] GO:0014069 [postsynaptic density] GO:0016020 [membrane] GO:0016301 [kinase activity] GO:0016310 [phosphorylation] GO:0016740 [transferase activity] GO:0017146 [NMDA selective glutamate receptor complex] GO:0018108 [peptidyl-tyrosine phosphorylation] GO:0030027 [lamellipodium] GO:0030054 [cell junction] GO:0030155 [regulation of cell adhesion] GO:0030334 [regulation of cell migration] GO:0030335 [positive regulation of cell migration] GO:0030425 [dendrite] GO:0030426 [growth cone] GO:0030500 [regulation of bone mineralization] GO:0030502 [negative regulation of bone mineralization] GO:0030838 [positive regulation of actin filament polymerization] GO:0031234 [extrinsic component of cytoplasmic side of plasma membrane] GO:0032960 [regulation of inositol trisphosphate biosynthetic process] GO:0033209 [tumor necrosis factor-mediated signaling pathway] GO:0035235 [ionotropic glutamate receptor signaling pathway] GO:0038083 [peptidyl-tyrosine autophosphorylation] GO:0042127 [regulation of cell proliferation] GO:0042976 [activation of Janus kinase activity] GO:0042995 [cell projection] GO:0043025 [neuronal cell body] GO:0043066 [negative regulation of apoptotic process] GO:0043267 [negative regulation of potassium ion transport] GO:0043524 [negative regulation of neuron apoptotic process] GO:0043552 [positive regulation of phosphatidylinositol 3-kinase activity] GO:0044297 [cell body] GO:0045087 [innate immune response] GO:0045453 [bone resorption] GO:0045638 [negative regulation of myeloid cell differentiation] GO:0045765 [regulation of angiogenesis] GO:0045860 [positive regulation of protein kinase activity] GO:0046330 [positive regulation of JNK cascade] GO:0046777 [protein autophosphorylation] GO:0048010 [vascular endothelial growth factor receptor signaling pathway] GO:0048471 [perinuclear region of cytoplasm] GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation] GO:0051279 [regulation of release of sequestered calcium ion into cytosol] GO:0051968 [positive regulation of synaptic transmission, glutamatergic] GO:0060291 [long-term synaptic potentiation] GO:0070098 [chemokine-mediated signaling pathway] GO:0070374 [positive regulation of ERK1 and ERK2 cascade] GO:0071300 [cellular response to retinoic acid] GO:0097440 [apical dendrite] GO:2000058 [regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process] GO:2000114 [regulation of establishment of cell polarity] GO:2000249 [regulation of actin cytoskeleton reorganization] GO:2000310 [regulation of NMDA receptor activity] GO:2000463 [positive regulation of excitatory postsynaptic potential] GO:2000538 [positive regulation of B cell chemotaxis]
Enzymes ENZYME proteins Transferases Kinases Tyr protein kinases Predicted intracellular proteins Plasma proteins Disease related genes Potential drug targets Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade] GO:0000166 [nucleotide binding] GO:0000302 [response to reactive oxygen species] GO:0001525 [angiogenesis] GO:0001556 [oocyte maturation] GO:0001666 [response to hypoxia] GO:0001954 [positive regulation of cell-matrix adhesion] GO:0002040 [sprouting angiogenesis] GO:0002250 [adaptive immune response] GO:0002315 [marginal zone B cell differentiation] GO:0002376 [immune system process] GO:0002688 [regulation of leukocyte chemotaxis] GO:0004672 [protein kinase activity] GO:0004683 [calmodulin-dependent protein kinase activity] GO:0004713 [protein tyrosine kinase activity] GO:0004715 [non-membrane spanning protein tyrosine kinase activity] GO:0004871 [signal transducer activity] GO:0004972 [NMDA glutamate receptor activity] GO:0005102 [receptor binding] GO:0005515 [protein binding] GO:0005524 [ATP binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005856 [cytoskeleton] GO:0005886 [plasma membrane] GO:0005925 [focal adhesion] GO:0005938 [cell cortex] GO:0006461 [protein complex assembly] GO:0006468 [protein phosphorylation] GO:0006915 [apoptotic process] GO:0006950 [response to stress] GO:0006968 [cellular defense response] GO:0006970 [response to osmotic stress] GO:0007015 [actin filament organization] GO:0007155 [cell adhesion] GO:0007165 [signal transduction] GO:0007166 [cell surface receptor signaling pathway] GO:0007172 [signal complex assembly] GO:0007173 [epidermal growth factor receptor signaling pathway] GO:0007204 [positive regulation of cytosolic calcium ion concentration] GO:0007229 [integrin-mediated signaling pathway] GO:0008284 [positive regulation of cell proliferation] GO:0008285 [negative regulation of cell proliferation] GO:0008360 [regulation of cell shape] GO:0009612 [response to mechanical stimulus] GO:0009725 [response to hormone] GO:0009749 [response to glucose] GO:0010226 [response to lithium ion] GO:0010243 [response to organonitrogen compound] GO:0010595 [positive regulation of endothelial cell migration] GO:0010656 [negative regulation of muscle cell apoptotic process] GO:0010752 [regulation of cGMP-mediated signaling] GO:0010758 [regulation of macrophage chemotaxis] GO:0010976 [positive regulation of neuron projection development] GO:0014009 [glial cell proliferation] GO:0014069 [postsynaptic density] GO:0016020 [membrane] GO:0016301 [kinase activity] GO:0016310 [phosphorylation] GO:0016740 [transferase activity] GO:0017146 [NMDA selective glutamate receptor complex] GO:0018108 [peptidyl-tyrosine phosphorylation] GO:0019899 [enzyme binding] GO:0030027 [lamellipodium] GO:0030054 [cell junction] GO:0030154 [cell differentiation] GO:0030155 [regulation of cell adhesion] GO:0030279 [negative regulation of ossification] GO:0030307 [positive regulation of cell growth] GO:0030334 [regulation of cell migration] GO:0030335 [positive regulation of cell migration] GO:0030424 [axon] GO:0030425 [dendrite] GO:0030426 [growth cone] GO:0030500 [regulation of bone mineralization] GO:0030502 [negative regulation of bone mineralization] GO:0030826 [regulation of cGMP biosynthetic process] GO:0030838 [positive regulation of actin filament polymerization] GO:0031175 [neuron projection development] GO:0031234 [extrinsic component of cytoplasmic side of plasma membrane] GO:0031625 [ubiquitin protein ligase binding] GO:0032270 [positive regulation of cellular protein metabolic process] GO:0032403 [protein complex binding] GO:0032960 [regulation of inositol trisphosphate biosynthetic process] GO:0033209 [tumor necrosis factor-mediated signaling pathway] GO:0035235 [ionotropic glutamate receptor signaling pathway] GO:0035902 [response to immobilization stress] GO:0038083 [peptidyl-tyrosine autophosphorylation] GO:0042127 [regulation of cell proliferation] GO:0042220 [response to cocaine] GO:0042493 [response to drug] GO:0042542 [response to hydrogen peroxide] GO:0042976 [activation of Janus kinase activity] GO:0042995 [cell projection] GO:0043025 [neuronal cell body] GO:0043066 [negative regulation of apoptotic process] GO:0043149 [stress fiber assembly] GO:0043197 [dendritic spine] GO:0043267 [negative regulation of potassium ion transport] GO:0043423 [3-phosphoinositide-dependent protein kinase binding] GO:0043507 [positive regulation of JUN kinase activity] GO:0043524 [negative regulation of neuron apoptotic process] GO:0043534 [blood vessel endothelial cell migration] GO:0043552 [positive regulation of phosphatidylinositol 3-kinase activity] GO:0044297 [cell body] GO:0045087 [innate immune response] GO:0045121 [membrane raft] GO:0045428 [regulation of nitric oxide biosynthetic process] GO:0045429 [positive regulation of nitric oxide biosynthetic process] GO:0045453 [bone resorption] GO:0045471 [response to ethanol] GO:0045638 [negative regulation of myeloid cell differentiation] GO:0045727 [positive regulation of translation] GO:0045765 [regulation of angiogenesis] GO:0045766 [positive regulation of angiogenesis] GO:0045860 [positive regulation of protein kinase activity] GO:0046330 [positive regulation of JNK cascade] GO:0046777 [protein autophosphorylation] GO:0048010 [vascular endothelial growth factor receptor signaling pathway] GO:0048041 [focal adhesion assembly] GO:0048471 [perinuclear region of cytoplasm] GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation] GO:0050848 [regulation of calcium-mediated signaling] GO:0051000 [positive regulation of nitric-oxide synthase activity] GO:0051279 [regulation of release of sequestered calcium ion into cytosol] GO:0051591 [response to cAMP] GO:0051592 [response to calcium ion] GO:0051968 [positive regulation of synaptic transmission, glutamatergic] GO:0060291 [long-term synaptic potentiation] GO:0060292 [long term synaptic depression] GO:0070098 [chemokine-mediated signaling pathway] GO:0070374 [positive regulation of ERK1 and ERK2 cascade] GO:0071300 [cellular response to retinoic acid] GO:0071498 [cellular response to fluid shear stress] GO:0090630 [activation of GTPase activity] GO:0097440 [apical dendrite] GO:2000058 [regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process] GO:2000060 [positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process] GO:2000114 [regulation of establishment of cell polarity] GO:2000249 [regulation of actin cytoskeleton reorganization] GO:2000310 [regulation of NMDA receptor activity] GO:2000379 [positive regulation of reactive oxygen species metabolic process] GO:2000463 [positive regulation of excitatory postsynaptic potential] GO:2000538 [positive regulation of B cell chemotaxis] GO:2000573 [positive regulation of DNA biosynthetic process]
Enzymes ENZYME proteins Transferases Kinases Tyr protein kinases Predicted intracellular proteins Plasma proteins Disease related genes Potential drug targets Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding] GO:0001525 [angiogenesis] GO:0001954 [positive regulation of cell-matrix adhesion] GO:0002040 [sprouting angiogenesis] GO:0002250 [adaptive immune response] GO:0002315 [marginal zone B cell differentiation] GO:0002376 [immune system process] GO:0002688 [regulation of leukocyte chemotaxis] GO:0004672 [protein kinase activity] GO:0004683 [calmodulin-dependent protein kinase activity] GO:0004713 [protein tyrosine kinase activity] GO:0004715 [non-membrane spanning protein tyrosine kinase activity] GO:0004871 [signal transducer activity] GO:0004972 [NMDA glutamate receptor activity] GO:0005102 [receptor binding] GO:0005515 [protein binding] GO:0005524 [ATP binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005856 [cytoskeleton] GO:0005886 [plasma membrane] GO:0005925 [focal adhesion] GO:0005938 [cell cortex] GO:0006461 [protein complex assembly] GO:0006468 [protein phosphorylation] GO:0006915 [apoptotic process] GO:0006950 [response to stress] GO:0006968 [cellular defense response] GO:0007165 [signal transduction] GO:0007166 [cell surface receptor signaling pathway] GO:0007172 [signal complex assembly] GO:0007173 [epidermal growth factor receptor signaling pathway] GO:0007229 [integrin-mediated signaling pathway] GO:0008284 [positive regulation of cell proliferation] GO:0008285 [negative regulation of cell proliferation] GO:0008360 [regulation of cell shape] GO:0010595 [positive regulation of endothelial cell migration] GO:0010758 [regulation of macrophage chemotaxis] GO:0010976 [positive regulation of neuron projection development] GO:0014069 [postsynaptic density] GO:0016020 [membrane] GO:0016301 [kinase activity] GO:0016310 [phosphorylation] GO:0016740 [transferase activity] GO:0017146 [NMDA selective glutamate receptor complex] GO:0018108 [peptidyl-tyrosine phosphorylation] GO:0030027 [lamellipodium] GO:0030054 [cell junction] GO:0030155 [regulation of cell adhesion] GO:0030334 [regulation of cell migration] GO:0030335 [positive regulation of cell migration] GO:0030425 [dendrite] GO:0030426 [growth cone] GO:0030500 [regulation of bone mineralization] GO:0030502 [negative regulation of bone mineralization] GO:0030838 [positive regulation of actin filament polymerization] GO:0031234 [extrinsic component of cytoplasmic side of plasma membrane] GO:0032960 [regulation of inositol trisphosphate biosynthetic process] GO:0033209 [tumor necrosis factor-mediated signaling pathway] GO:0035235 [ionotropic glutamate receptor signaling pathway] GO:0038083 [peptidyl-tyrosine autophosphorylation] GO:0042127 [regulation of cell proliferation] GO:0042976 [activation of Janus kinase activity] GO:0042995 [cell projection] GO:0043025 [neuronal cell body] GO:0043066 [negative regulation of apoptotic process] GO:0043267 [negative regulation of potassium ion transport] GO:0043524 [negative regulation of neuron apoptotic process] GO:0043552 [positive regulation of phosphatidylinositol 3-kinase activity] GO:0044297 [cell body] GO:0045087 [innate immune response] GO:0045453 [bone resorption] GO:0045638 [negative regulation of myeloid cell differentiation] GO:0045765 [regulation of angiogenesis] GO:0045860 [positive regulation of protein kinase activity] GO:0046330 [positive regulation of JNK cascade] GO:0046777 [protein autophosphorylation] GO:0048010 [vascular endothelial growth factor receptor signaling pathway] GO:0048471 [perinuclear region of cytoplasm] GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation] GO:0051279 [regulation of release of sequestered calcium ion into cytosol] GO:0051968 [positive regulation of synaptic transmission, glutamatergic] GO:0060291 [long-term synaptic potentiation] GO:0070098 [chemokine-mediated signaling pathway] GO:0070374 [positive regulation of ERK1 and ERK2 cascade] GO:0071300 [cellular response to retinoic acid] GO:0097440 [apical dendrite] GO:2000058 [regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process] GO:2000114 [regulation of establishment of cell polarity] GO:2000249 [regulation of actin cytoskeleton reorganization] GO:2000310 [regulation of NMDA receptor activity] GO:2000463 [positive regulation of excitatory postsynaptic potential] GO:2000538 [positive regulation of B cell chemotaxis]