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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 833.9
Min RPKM: 35.4
Std RPKM: 213.4
Median RPKM: 317.7
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
833.9
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
820.7
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
778.1
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
746.1
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
727.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
677.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
666.4
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
621.8
GTEX-Y111-2626-SM-4TT24
50-59 years, male
604.2
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
600.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
556.4
GTEX-1445S-2926-SM-5O993
60-69 years, male
552.1
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
545.3
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
542.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
542.5
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
535.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
516.9
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
511.6
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
497.5
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
476.5
GTEX-X261-2426-SM-4PQZU
50-59 years, male
455.1
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
398.0
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
366.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
348.3
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
347.3
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
342.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
342.5
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
327.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
317.7
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
308.5
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
301.2
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
300.6
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
295.7
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
273.3
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
270.5
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
263.7
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
260.9
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
251.4
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
237.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
215.3
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
203.1
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
202.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
194.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
194.8
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
183.7
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
172.2
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
137.3
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
132.6
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
124.4
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
119.9
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
116.7
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
112.4
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
105.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
85.0
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
72.1
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
58.7
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
35.4
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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