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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 294.8
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 332.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 243.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 500.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 478.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 323.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 292
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 470.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 430.8
Min RPKM: 64.0
Std RPKM: 64.6
Median RPKM: 173.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
430.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
418.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
362.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
351.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
306.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
299.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
292.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
280.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
277.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
276.5
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
272.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
264.8
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
255.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
251.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
251.1
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
241.5
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
240.9
GTEX-QEL4-1226-SM-447A4
50-59 years, male
236.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
230.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
229.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
228.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
227.8
GTEX-S33H-1626-SM-4AD68
30-39 years, male
227.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
225.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
223.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
218.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
218.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
214.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
212.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
208.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
208.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
208.6
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
208.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
207.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
205.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
205.8
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
204.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
202.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
200.9
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
200.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
198.9
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
196.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
195.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
194.3
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
192.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
192.2
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
192.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
191.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
191.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
186.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
186.4
GTEX-REY6-1226-SM-48FDR
60-69 years, male
185.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
185.1
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
184.5
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
178.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
177.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
177.0
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
176.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
175.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
173.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
169.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
168.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
168.2
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
167.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
165.7
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
163.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
162.3
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
159.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
158.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
157.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
156.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
154.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
153.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
153.6
GTEX-12696-0826-SM-5EGGE
60-69 years, male
152.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
150.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
149.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
149.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
148.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
147.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
146.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
146.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
142.9
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
141.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
140.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
140.5
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
139.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
139.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
138.5
GTEX-RU72-1426-SM-46MUF
50-59 years, female
137.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
136.6
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
131.3
GTEX-QESD-2026-SM-447BI
20-29 years, male
129.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
129.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
127.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
126.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
125.2
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
125.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
123.5
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
123.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
123.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
121.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
118.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
115.7
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
115.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
112.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
109.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
109.0
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
108.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
107.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
106.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
105.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
103.9
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
101.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
97.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
86.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
75.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
73.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
64.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
