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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 304.4
Min RPKM: 3.9
Std RPKM: 59.0
Median RPKM: 69.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
304.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
231.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
211.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
211.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
201.4
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
195.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
192.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
179.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
173.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
171.9
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
170.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
156.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
144.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
143.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
141.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
132.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
129.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
128.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
125.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
119.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
118.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
117.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
111.5
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
104.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
102.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
102.7
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
98.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
95.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
92.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
88.8
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
87.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
86.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
85.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
85.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
84.0
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
83.6
GTEX-QCQG-1226-SM-48U23
50-59 years, female
83.0
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
79.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
78.7
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
78.7
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
78.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
78.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
77.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
75.2
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
75.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
71.5
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
70.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
69.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
69.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
66.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
62.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
61.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
56.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
56.6
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
54.2
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
52.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
51.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
50.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
48.1
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
47.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
47.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
45.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
43.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
41.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
40.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
40.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
40.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
38.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
38.7
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
36.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
36.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
35.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
34.5
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
33.3
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
31.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
30.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
29.1
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
28.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
28.6
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
24.7
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
22.8
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
22.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
22.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
21.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
21.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
21.1
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
19.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
19.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
16.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
10.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
9.1
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
8.6
GTEX-11I78-2026-SM-5987C
50-59 years, female
6.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
5.5
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
4.6
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
3.9
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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