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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 569.1
Min RPKM: 238.0
Std RPKM: 67.3
Median RPKM: 366.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
569.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
545.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
521.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
515.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
512.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
499.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
479.9
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
470.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
470.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
468.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
468.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
463.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
461.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
455.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
449.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
448.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
448.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
446.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
446.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
442.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
439.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
437.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
435.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
434.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
432.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
430.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
429.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
421.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
419.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
418.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
418.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
416.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
415.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
411.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
410.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
400.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
398.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
397.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
396.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
396.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
392.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
391.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
389.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
387.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
384.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
377.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
375.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
368.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
367.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
367.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
366.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
366.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
365.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
364.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
362.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
358.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
357.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
357.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
356.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
354.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
353.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
352.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
351.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
346.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
345.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
344.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
342.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
341.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
341.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
340.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
340.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
334.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
332.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
331.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
330.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
329.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
328.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
327.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
323.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
323.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
323.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
322.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
322.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
319.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
317.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
316.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
311.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
311.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
310.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
310.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
306.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
305.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
302.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
301.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
285.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
285.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
282.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
281.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
280.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
278.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
274.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
272.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
267.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
238.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.