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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1460.2
Min RPKM: 492.4
Std RPKM: 209.2
Median RPKM: 821.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1460.2
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1416.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1330.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1305.5
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1247.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1243.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1238.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1229.1
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1228.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1204.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1190.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1159.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1155.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1139.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1116.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1109.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1104.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1076.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1076.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1074.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1056.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1049.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1039.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1007.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
997.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
996.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
970.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
960.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
951.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
946.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
942.2
GTEX-P78B-1926-SM-3P616
40-49 years, female
926.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
910.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
905.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
893.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
892.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
882.3
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
876.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
869.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
856.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
850.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
844.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
840.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
833.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
832.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
830.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
830.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
826.6
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
821.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
817.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
805.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
805.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
790.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
788.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
781.2
GTEX-11I78-1926-SM-59878
50-59 years, female
780.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
777.6
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
774.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
773.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
772.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
769.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
757.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
754.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
754.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
742.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
739.7
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
739.6
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
738.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
737.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
737.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
729.1
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
723.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
722.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
721.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
719.8
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
718.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
710.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
698.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
687.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
687.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
687.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
676.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
666.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
654.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
651.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
649.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
646.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
643.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
642.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
640.1
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
619.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
602.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
580.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
574.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
572.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
566.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
492.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.