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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2269.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2327.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4189.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1507.5
Min RPKM: 208.6
Std RPKM: 155.0
Median RPKM: 399.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1507.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
989.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
921.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
891.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
806.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
781.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
725.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
717.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
702.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
697.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
685.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
670.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
658.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
641.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
639.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
637.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
629.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
621.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
616.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
615.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
613.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
599.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
596.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
592.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
589.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
574.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
574.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
571.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
569.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
562.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
556.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
549.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
549.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
547.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
545.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
538.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
535.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
526.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
522.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
520.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
519.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
518.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
513.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
512.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
511.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
505.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
499.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
493.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
492.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
491.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
489.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
482.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
476.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
475.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
472.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
471.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
470.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
470.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
468.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
466.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
465.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
465.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
464.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
463.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
463.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
462.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
461.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
459.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
457.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
456.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
448.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
448.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
445.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
445.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
444.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
439.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
437.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
437.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
436.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
436.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
434.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
434.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
433.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
430.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
427.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
426.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
425.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
425.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
424.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
423.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
421.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
421.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
417.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
411.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
407.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
407.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
407.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
406.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
406.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
406.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
404.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
404.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
404.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
403.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
402.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
401.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
400.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
397.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
394.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
389.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
388.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
388.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
387.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
385.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
384.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
382.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
380.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
379.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
378.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
377.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
375.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
374.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
374.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
371.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
369.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
368.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
367.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
367.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
367.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
366.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
364.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
363.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
361.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
351.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
350.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
350.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
350.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
343.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
342.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
341.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
340.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
340.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
339.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
335.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
335.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
332.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
331.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
331.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
330.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
329.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
328.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
326.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
326.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
325.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
321.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
321.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
320.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
320.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
319.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
318.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
317.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
312.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
311.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
310.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
309.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
309.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
307.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
304.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
303.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
302.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
302.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
296.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
295.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
294.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
293.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
293.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
291.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
290.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
290.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
290.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
286.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
282.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
282.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
282.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
279.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
277.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
277.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
276.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
275.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
275.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
270.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
267.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
265.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
264.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
261.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
259.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
257.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
252.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
250.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
246.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
245.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
245.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
245.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
244.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
238.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
236.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
230.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
226.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
226.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
223.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
221.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
209.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
209.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
208.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.