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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 44.1
Min RPKM: 16.4
Std RPKM: 6.1
Median RPKM: 28.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
44.1
GTEX-111YS-1426-SM-5GID8
60-69 years, male
40.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
39.7
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
39.7
GTEX-1122O-1326-SM-5H11F
60-69 years, female
37.5
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
36.9
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
36.9
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
36.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
36.2
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
35.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
35.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
34.6
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
34.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
34.5
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
34.5
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
34.2
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
33.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
33.4
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
33.1
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
32.5
GTEX-ZTSS-0926-SM-59865
40-49 years, male
32.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
32.3
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
31.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
31.3
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
31.3
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
31.3
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
31.2
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
31.2
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
31.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
30.8
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
30.6
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
30.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
30.5
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
30.5
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
30.5
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
30.2
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
30.2
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
30.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
30.0
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
29.9
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
29.2
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
29.2
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
28.9
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
28.7
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
28.4
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
28.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
28.0
GTEX-13113-1226-SM-5EGHT
60-69 years, female
27.6
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
27.5
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
27.4
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
27.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
27.1
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
27.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
26.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
26.7
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
26.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
26.2
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
25.7
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
25.7
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
25.6
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
25.5
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
25.5
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
25.1
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
25.1
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
25.1
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
24.8
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
24.7
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
24.3
GTEX-13O61-1326-SM-5KM31
60-69 years, male
22.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
22.6
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
21.3
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
20.8
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
20.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
20.6
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
20.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
20.0
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
20.0
GTEX-1192X-2526-SM-59868
50-59 years, male
19.5
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
18.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
18.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
18.1
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
18.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
18.0
GTEX-117YX-0326-SM-5GICL
50-59 years, male
17.2
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
17.2
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
17.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
16.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
16.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.