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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 528.2
Min RPKM: 213.1
Std RPKM: 63.8
Median RPKM: 339.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
528.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
516.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
471.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
465.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
462.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
455.1
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
447.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
444.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
442.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
424.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
424.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
424.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
423.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
419.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
419.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
410.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
409.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
408.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
407.9
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
407.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
407.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
406.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
401.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
399.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
391.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
390.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
388.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
384.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
381.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
380.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
377.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
375.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
374.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
374.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
371.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
371.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
369.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
369.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
366.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
362.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
361.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
359.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
358.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
355.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
353.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
351.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
350.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
350.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
349.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
345.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
344.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
339.4
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
339.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
337.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
336.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
336.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
332.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
332.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
329.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
326.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
325.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
323.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
323.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
321.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
319.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
318.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
315.9
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
314.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
311.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
310.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
308.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
302.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
302.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
301.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
298.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
298.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
296.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
294.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
293.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
293.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
291.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
291.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
291.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
285.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
281.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
280.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
280.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
279.7
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
279.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
279.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
273.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
272.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
269.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
269.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
268.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
266.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
262.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
261.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
257.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
256.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
252.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
233.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
214.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
213.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.