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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1537.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1571.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2955.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 987.8
Min RPKM: 193.5
Std RPKM: 123.3
Median RPKM: 370.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
987.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
880.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
758.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
733.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
696.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
677.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
674.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
651.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
635.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
623.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
622.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
621.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
615.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
600.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
591.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
585.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
582.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
575.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
564.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
548.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
544.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
542.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
542.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
537.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
536.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
534.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
533.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
531.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
522.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
517.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
507.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
507.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
498.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
497.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
493.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
492.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
488.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
487.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
487.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
484.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
484.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
479.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
477.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
476.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
476.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
475.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
474.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
473.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
471.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
470.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
470.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
466.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
466.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
463.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
459.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
459.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
457.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
457.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
454.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
454.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
452.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
451.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
448.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
445.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
442.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
440.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
438.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
437.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
435.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
435.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
427.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
427.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
425.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
422.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
421.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
421.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
416.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
414.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
412.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
411.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
408.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
404.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
402.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
402.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
401.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
401.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
401.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
400.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
400.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
398.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
395.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
391.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
386.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
386.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
385.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
385.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
383.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
383.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
382.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
381.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
379.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
379.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
378.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
373.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
373.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
373.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
371.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
368.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
368.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
366.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
365.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
363.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
361.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
359.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
359.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
357.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
357.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
355.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
354.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
349.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
349.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
349.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
347.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
347.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
345.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
344.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
344.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
341.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
340.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
338.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
338.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
337.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
333.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
333.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
332.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
331.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
330.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
330.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
325.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
323.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
323.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
323.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
322.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
322.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
322.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
318.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
318.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
315.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
314.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
312.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
312.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
309.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
309.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
307.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
307.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
304.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
296.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
296.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
294.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
292.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
292.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
291.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
290.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
290.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
290.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
289.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
289.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
288.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
286.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
286.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
285.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
285.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
284.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
284.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
283.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
281.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
281.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
279.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
278.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
278.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
278.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
278.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
278.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
277.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
275.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
274.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
272.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
272.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
272.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
270.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
270.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
269.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
267.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
266.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
264.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
263.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
257.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
249.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
247.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
247.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
245.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
245.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
244.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
244.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
243.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
239.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
238.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
235.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
228.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
222.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
220.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
220.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
202.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
193.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.