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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 55.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 60.5
Min RPKM: 18.1
Std RPKM: 8.5
Median RPKM: 36.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
60.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
51.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
51.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
51.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
51.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
50.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
50.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
49.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
49.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
49.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
48.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
48.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
47.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
47.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
47.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
47.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
46.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
46.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
46.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
45.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
45.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
45.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
45.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
44.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
44.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
44.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
44.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
43.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
43.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
43.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
43.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
42.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
42.8
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
41.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
41.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
41.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
41.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
41.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
41.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
41.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
41.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
40.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
39.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
39.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
39.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
39.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
39.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
38.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
38.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
38.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
38.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
38.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
38.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
36.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
36.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
36.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
36.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
36.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
36.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
36.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
36.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
35.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
35.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
35.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
34.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
34.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
34.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
33.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
33.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
33.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
33.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
33.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
33.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
32.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
32.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
32.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
32.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
32.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
31.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
31.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
31.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
31.0
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
30.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
30.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
30.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
30.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
30.3
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
30.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
29.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
29.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
29.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
28.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
28.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
28.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
27.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
27.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
27.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
27.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
26.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
26.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
26.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
26.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
26.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
25.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
25.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
24.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
23.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
23.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
23.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
22.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
22.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
21.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
21.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
18.1
Show all
Brain - Frontal Cortex (BA9) RPKM: 49.9
Samples: 108
Max RPKM: 78.8
Min RPKM: 13.3
Std RPKM: 16.6
Median RPKM: 53.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
78.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
78.2
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
76.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
75.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
75.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
74.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
73.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
73.0
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
72.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
71.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
70.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
70.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
70.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
69.9
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
69.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
69.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
68.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
68.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
67.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
66.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
66.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
64.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
62.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
62.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
62.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
62.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
61.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
61.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
60.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
60.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
60.5
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
60.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
60.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
60.2
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
60.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
59.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
59.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
59.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
58.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
57.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
57.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
56.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
56.4
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
56.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
56.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
55.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
55.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
55.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
55.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
54.9
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
54.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
53.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
53.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
53.3
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
52.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
52.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
51.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
51.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
51.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
50.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
49.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
49.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
49.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
48.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
48.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
48.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
48.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
47.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
47.1
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
45.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
43.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
43.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
42.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
42.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
41.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
40.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
40.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
39.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
39.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
38.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
37.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
37.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
37.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
35.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
35.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
35.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
32.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
32.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
29.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
29.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
28.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
28.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
28.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
27.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
26.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
26.4
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
25.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
24.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
24.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
22.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
21.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
20.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
20.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
20.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
17.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
16.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
16.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
13.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 5
