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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3.3
Min RPKM: 0.2
Std RPKM: 0.5
Median RPKM: 0.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
3.3
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
3.0
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
2.6
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
2.4
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
2.3
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
1.8
GTEX-13O61-1326-SM-5KM31
60-69 years, male
1.8
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
1.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
1.7
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
1.6
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
1.6
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
1.5
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
1.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
1.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
1.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
1.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
1.3
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
1.3
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
1.3
GTEX-1192X-2526-SM-59868
50-59 years, male
1.2
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
1.2
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
1.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
1.2
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
1.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
1.2
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
1.2
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
1.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
1.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
1.1
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
1.1
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
1.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
1.1
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
1.1
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
1.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
1.0
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
1.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
1.0
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
1.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
1.0
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
1.0
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
0.9
GTEX-13113-1226-SM-5EGHT
60-69 years, female
0.9
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
0.9
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
0.9
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
0.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
0.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
0.8
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
0.8
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
0.8
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
0.8
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
0.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
0.8
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
0.8
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
0.7
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
0.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
0.7
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
0.7
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
0.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
0.7
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
0.7
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
0.7
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
0.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
0.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
0.6
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
0.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.6
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
0.6
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
0.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.6
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
0.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
0.6
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
0.6
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
0.6
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
0.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
0.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
0.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
0.5
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
0.5
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
0.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
0.5
GTEX-1122O-1326-SM-5H11F
60-69 years, female
0.4
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
0.4
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
0.4
GTEX-ZTSS-0926-SM-59865
40-49 years, male
0.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
0.3
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
0.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
0.2
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
0.2
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
