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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 26221.5
Min RPKM: 88.3
Std RPKM: 4716.7
Median RPKM: 1339.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
26221.5
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
20584.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
15773.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
13949.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
13213.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
12909.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
12346.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
12267.1
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
11133.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
11052.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
10874.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
10160.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
9737.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
9734.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
8734.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
8611.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
8523.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
7693.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
6842.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
6590.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
6231.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
5578.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
5128.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
4077.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
3817.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
3620.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
3506.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
3387.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
3355.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
3318.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
3280.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
3107.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
3040.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
2913.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
2806.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
2805.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
2770.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
2659.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
2558.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
2373.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
2293.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
2290.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
2190.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
2031.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
1999.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
1897.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
1837.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1835.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
1694.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
1550.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1518.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
1383.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
1296.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1245.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
1085.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
1064.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
1056.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1043.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
963.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
914.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
914.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
901.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
894.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
892.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
859.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
843.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
842.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
824.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
808.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
795.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
660.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
612.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
563.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
546.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
538.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
535.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
530.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
525.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
521.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
511.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
505.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
499.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
470.6
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
464.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
452.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
447.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
426.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
424.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
420.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
415.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
363.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
362.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
305.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
264.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
263.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
240.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
227.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
218.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
215.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
170.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
167.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
153.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
146.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
88.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.