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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 60.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1633.8
Min RPKM: 6.6
Std RPKM: 241.6
Median RPKM: 63.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
1633.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
1485.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
1009.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
804.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
619.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
422.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
416.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
390.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
369.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
359.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
348.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
300.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
286.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
269.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
234.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
225.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
218.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
207.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
178.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
159.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
152.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
151.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
148.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
147.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
144.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
139.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
135.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
130.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
127.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
123.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
121.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
120.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
116.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
108.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
102.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
100.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
100.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
99.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
98.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
97.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
97.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
96.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
96.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
92.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
89.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
88.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
85.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
83.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
80.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
79.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
78.5
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
72.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
70.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
70.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
69.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
67.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
64.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
63.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
61.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
56.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
56.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
55.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
55.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
54.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
54.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
51.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
50.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
49.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
49.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
49.0
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
44.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
44.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
43.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
42.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
42.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
40.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
40.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
40.1
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
39.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
37.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
37.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
37.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
36.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
35.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
35.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
33.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
31.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
30.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
30.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
29.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
29.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
29.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
28.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
28.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
27.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
26.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
25.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
25.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
24.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
22.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
21.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
20.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
19.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
17.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
16.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
16.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
12.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
11.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
11.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
11.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
10.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
10.1
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
9.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
6.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 146.2
Samples: 108
Max RPKM: 986.5
Min RPKM: 4.7
Std RPKM: 181.9
Median RPKM: 80.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
986.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
965.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
663.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
633.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
603.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
570.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
566.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
530.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
418.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
372.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
325.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
319.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
282.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
265.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
262.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
259.4
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
245.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
236.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
235.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
230.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
226.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
225.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
214.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
192.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
175.9
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
174.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
173.2
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
170.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
167.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
163.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
157.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
150.5
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
146.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
144.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
136.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
135.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
134.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
132.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
129.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
124.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
123.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
121.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
121.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
114.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
114.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
113.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
111.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
100.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
95.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
91.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
86.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
85.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
83.9
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
82.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
79.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
75.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
75.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
74.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
72.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
71.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
70.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
70.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
68.8
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
66.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
64.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
60.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
59.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
58.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
53.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
49.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
48.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
45.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
45.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
43.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
43.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
42.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
42.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
40.5
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
38.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
35.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
34.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
31.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
30.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
28.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
27.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
27.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
27.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
26.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
26.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
26.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
25.9
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
25.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
24.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
24.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
23.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
23.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
22.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
20.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
17.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
16.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
16.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
14.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
14.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
11.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
9.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
9.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
8.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
4.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.