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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2980.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 356.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 21.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2032.7
Min RPKM: 3.8
Std RPKM: 315.5
Median RPKM: 70.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
2032.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
1714.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
1671.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
1663.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
1575.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1553.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1150.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
998.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
884.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
727.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
697.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
692.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
632.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
627.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
581.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
568.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
558.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
521.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
500.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
467.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
441.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
392.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
389.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
388.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
380.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
368.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
332.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
329.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
317.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
317.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
308.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
294.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
291.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
282.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
271.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
266.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
263.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
262.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
261.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
260.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
252.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
243.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
242.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
239.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
235.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
228.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
223.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
222.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
211.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
204.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
202.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
202.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
196.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
189.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
188.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
180.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
173.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
165.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
161.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
157.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
156.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
155.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
153.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
149.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
149.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
142.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
141.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
140.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
139.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
138.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
137.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
132.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
131.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
131.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
128.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
121.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
118.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
112.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
111.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
107.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
107.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
104.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
102.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
95.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
93.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
93.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
91.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
90.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
89.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
88.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
88.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
87.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
84.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
84.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
84.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
82.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
80.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
79.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
78.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
78.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
78.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
77.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
76.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
73.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
72.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
72.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
71.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
69.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
69.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
66.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
65.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
63.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
61.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
61.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
61.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
60.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
60.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
60.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
59.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
59.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
58.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
56.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
56.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
56.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
54.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
54.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
51.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
51.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
51.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
50.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
50.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
50.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
49.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
49.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
49.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
47.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
46.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
46.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
46.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
45.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
45.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
45.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
44.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
43.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
42.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
42.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
41.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
41.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
40.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
40.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
38.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
38.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
38.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
38.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
37.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
34.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
33.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
33.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
31.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
29.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
28.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
26.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
26.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
24.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
24.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
24.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
24.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
23.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
23.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
21.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
20.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
19.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
19.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
19.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
18.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
18.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
17.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
17.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
16.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
15.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
15.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
14.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
14.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
14.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
13.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
13.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
13.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
13.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
12.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
12.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
12.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
12.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
11.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
11.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
11.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
11.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
10.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
10.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
10.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
9.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
9.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
8.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
8.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
7.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
7.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
7.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
7.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
6.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
6.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
5.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
5.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
5.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
5.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
3.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.