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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 11
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 2.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 2.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 4.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 4.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 12.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 4
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 13.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 125.8
Min RPKM: 29.1
Std RPKM: 20.2
Median RPKM: 58.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
125.8
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
120.7
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
112.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
104.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
100.6
GTEX-12696-0826-SM-5EGGE
60-69 years, male
99.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
95.1
GTEX-X261-1726-SM-4PQYT
50-59 years, male
89.2
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
87.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
86.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
86.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
86.3
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
85.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
84.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
83.3
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
83.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
82.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
82.7
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
80.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
80.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
80.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
79.4
GTEX-13113-1326-SM-5GCOI
60-69 years, female
78.0
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
77.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
76.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
75.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
74.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
73.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
73.4
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
73.4
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
72.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
72.7
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
72.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
71.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
69.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
69.1
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
69.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
68.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
68.6
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
68.2
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
68.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
67.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
67.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
66.9
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
66.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
64.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
64.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
63.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
63.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
63.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
62.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
62.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
61.7
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
61.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
61.2
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
60.8
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
60.7
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
60.7
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
58.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
58.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
57.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
57.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
56.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
55.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
55.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
54.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
53.2
GTEX-RN64-1826-SM-48FDV
50-59 years, male
53.1
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
52.3
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
51.7
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
51.2
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
51.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
50.7
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
49.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
49.3
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
49.2
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
49.2
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
48.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
48.2
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
48.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
47.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
47.0
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
47.0
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
46.9
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
45.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
44.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
44.2
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
44.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
43.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
43.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
43.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
43.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
43.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
43.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
42.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
42.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
41.5
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
41.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
40.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
40.7
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
39.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
39.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
38.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
37.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
37.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
37.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
37.0
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
36.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
36.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
34.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
33.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
32.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
32.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
32.0
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
31.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
31.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
29.9
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
29.4
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
29.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
