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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 53.5
Min RPKM: 28.1
Std RPKM: 4.7
Median RPKM: 39.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
53.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
52.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
51.9
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
50.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
49.2
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
48.5
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
48.3
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
47.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
46.7
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
46.2
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
46.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
45.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
45.7
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
45.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
44.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
44.7
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
44.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
44.2
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
44.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
43.8
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
43.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
43.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
42.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
42.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
42.4
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
42.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
42.2
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
41.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
41.7
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
41.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
41.7
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
41.4
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
41.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
41.3
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
41.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
41.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
41.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
41.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
41.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
40.9
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
40.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
40.8
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
40.7
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
40.6
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
40.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
40.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
40.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
40.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
39.9
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
39.7
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
39.6
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
39.6
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
39.5
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
39.2
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
39.2
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
39.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
39.0
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
39.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
38.9
GTEX-S341-1226-SM-4AD5S
40-49 years, female
38.7
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
38.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
38.6
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
38.5
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
38.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
38.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
38.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
37.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
37.7
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
37.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
37.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
37.5
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
37.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
37.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
36.8
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
36.8
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
36.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
36.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
35.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
35.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
35.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
35.2
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
35.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
34.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
34.9
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
34.9
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
34.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
34.4
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
34.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
33.6
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
33.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
33.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
32.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
32.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
32.5
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
32.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
28.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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