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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 358.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 61.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 86.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 622.6
Min RPKM: 17.4
Std RPKM: 119.0
Median RPKM: 181.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
622.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
620.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
603.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
510.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
505.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
503.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
501.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
494.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
476.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
470.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
460.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
458.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
448.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
443.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
427.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
424.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
409.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
407.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
402.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
396.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
393.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
393.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
387.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
377.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
375.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
373.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
363.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
363.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
358.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
331.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
329.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
321.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
307.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
304.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
301.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
299.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
291.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
289.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
284.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
283.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
281.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
276.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
271.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
270.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
266.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
265.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
263.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
263.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
262.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
261.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
260.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
252.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
251.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
251.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
248.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
247.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
246.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
243.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
242.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
241.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
239.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
235.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
234.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
233.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
231.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
229.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
228.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
226.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
226.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
226.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
225.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
225.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
221.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
216.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
215.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
215.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
214.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
213.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
213.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
211.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
211.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
210.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
210.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
210.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
209.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
205.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
204.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
202.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
201.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
199.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
199.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
198.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
196.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
195.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
194.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
193.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
192.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
192.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
192.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
192.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
191.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
190.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
189.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
188.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
186.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
184.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
181.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
180.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
180.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
179.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
177.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
177.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
176.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
172.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
171.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
169.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
167.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
165.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
165.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
165.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
165.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
165.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
160.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
159.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
159.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
159.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
153.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
152.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
152.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
150.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
150.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
149.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
148.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
147.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
147.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
146.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
146.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
144.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
142.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
140.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
138.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
137.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
137.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
137.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
137.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
135.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
135.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
133.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
132.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
129.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
129.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
128.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
127.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
125.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
125.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
125.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
125.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
125.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
124.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
123.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
122.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
122.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
122.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
122.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
121.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
115.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
114.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
112.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
112.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
111.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
111.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
109.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
107.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
107.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
103.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
103.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
102.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
102.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
101.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
99.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
99.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
98.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
98.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
97.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
94.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
92.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
91.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
91.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
90.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
89.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
89.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
88.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
87.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
87.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
84.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
83.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
76.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
73.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
65.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
65.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
64.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
63.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
62.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
61.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
59.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
57.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
56.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
51.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
48.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
47.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
33.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
26.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
24.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
17.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.