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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 24.9
Min RPKM: 14.1
Std RPKM: 2.3
Median RPKM: 18.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
24.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
24.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
23.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
23.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
23.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
23.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
22.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
22.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
22.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
21.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
21.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
21.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
21.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
21.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
21.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
20.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
20.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
20.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
20.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
20.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
20.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
20.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
20.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
20.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
20.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
20.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
20.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
20.0
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
19.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
19.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
19.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
19.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
19.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
19.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
19.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
19.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
19.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
19.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
19.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
19.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
19.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
18.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
18.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
18.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
18.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
18.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
18.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
18.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
18.3
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
18.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
18.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
18.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
17.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
17.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
17.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
17.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
17.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
17.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
17.8
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
17.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
17.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
17.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
17.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
17.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
17.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
17.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
17.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
17.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
17.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
17.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
17.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
17.0
GTEX-144GN-2126-SM-5O99D
50-59 years, male
17.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
17.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
16.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
16.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
16.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
16.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
16.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
16.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
16.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
16.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
16.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
16.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
16.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
16.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
16.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
16.3
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
16.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
16.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
16.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
16.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
15.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
15.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
15.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
15.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
15.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
15.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
15.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
14.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
14.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
14.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
14.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
14.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.