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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 6.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 117
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 0
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1759.4
Min RPKM: 172.5
Std RPKM: 240.5
Median RPKM: 588.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1759.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1252.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
1245.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1233.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1230.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1218.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
1134.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
1130.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
1123.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
1109.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1074.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1065.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
1059.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1046.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
1026.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
1015.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
1014.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
996.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
988.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
959.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
951.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
947.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
930.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
916.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
910.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
909.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
903.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
896.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
895.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
879.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
858.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
858.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
856.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
855.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
852.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
851.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
851.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
842.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
841.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
833.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
829.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
824.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
823.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
822.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
817.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
814.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
812.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
796.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
795.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
783.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
781.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
768.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
765.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
764.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
749.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
743.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
741.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
734.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
728.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
725.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
723.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
708.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
703.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
703.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
701.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
699.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
698.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
697.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
689.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
682.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
681.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
680.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
668.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
666.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
665.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
663.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
662.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
660.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
658.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
656.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
655.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
653.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
646.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
644.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
641.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
636.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
634.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
630.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
628.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
627.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
625.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
622.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
618.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
617.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
612.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
612.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
610.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
606.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
606.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
604.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
604.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
602.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
600.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
599.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
599.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
596.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
589.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
586.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
581.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
580.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
578.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
575.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
571.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
570.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
563.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
563.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
559.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
556.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
552.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
552.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
550.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
550.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
549.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
544.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
543.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
543.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
538.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
536.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
528.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
524.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
521.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
516.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
514.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
512.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
510.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
508.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
504.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
503.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
493.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
493.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
484.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
483.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
482.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
481.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
479.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
475.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
469.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
468.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
465.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
461.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
459.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
458.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
457.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
457.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
454.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
454.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
452.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
450.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
448.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
446.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
442.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
438.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
435.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
435.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
435.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
434.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
432.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
428.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
419.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
414.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
411.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
411.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
407.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
405.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
404.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
401.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
394.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
392.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
390.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
389.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
386.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
385.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
383.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
383.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
381.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
380.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
379.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
369.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
366.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
361.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
361.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
359.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
359.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
359.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
357.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
356.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
355.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
353.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
332.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
329.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
320.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
316.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
312.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
312.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
308.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
306.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
304.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
291.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
286.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
265.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
260.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
254.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
234.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
172.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.