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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 81.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 32.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 12.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 287.2
Min RPKM: 30.9
Std RPKM: 55.2
Median RPKM: 98.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
287.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
282.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
261.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
246.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
245.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
243.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
239.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
238.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
235.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
230.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
224.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
207.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
207.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
206.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
204.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
204.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
201.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
200.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
199.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
198.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
198.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
198.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
197.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
194.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
193.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
191.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
190.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
190.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
189.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
187.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
185.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
183.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
183.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
172.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
171.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
171.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
167.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
167.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
166.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
164.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
164.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
161.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
161.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
161.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
160.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
157.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
157.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
157.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
155.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
151.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
151.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
151.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
151.4
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
151.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
151.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
150.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
150.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
150.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
148.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
146.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
145.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
144.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
141.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
140.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
139.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
139.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
134.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
131.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
130.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
129.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
129.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
128.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
127.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
127.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
125.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
122.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
122.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
121.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
118.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
118.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
118.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
117.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
116.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
114.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
112.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
112.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
111.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
109.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
108.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
108.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
108.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
108.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
108.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
107.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
107.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
105.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
105.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
105.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
104.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
104.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
103.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
103.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
103.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
102.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
101.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
100.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
99.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
97.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
97.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
96.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
96.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
96.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
94.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
93.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
93.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
92.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
92.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
91.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
90.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
90.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
89.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
88.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
87.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
86.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
85.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
85.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
85.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
84.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
84.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
83.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
82.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
82.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
82.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
82.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
81.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
80.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
80.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
80.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
79.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
79.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
79.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
78.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
77.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
77.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
76.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
76.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
76.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
75.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
75.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
74.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
74.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
74.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
74.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
73.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
73.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
71.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
71.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
70.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
70.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
69.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
69.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
69.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
67.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
67.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
66.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
66.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
66.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
65.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
65.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
65.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
65.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
64.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
63.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
63.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
63.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
61.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
61.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
61.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
60.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
60.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
60.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
59.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
59.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
59.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
58.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
58.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
58.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
57.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
57.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
57.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
56.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
56.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
55.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
55.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
55.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
55.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
54.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
54.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
54.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
53.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
52.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
52.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
51.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
51.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
51.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
50.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
48.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
48.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
46.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
44.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
39.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
37.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
31.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
30.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.