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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 138.7
Min RPKM: 62.7
Std RPKM: 16.1
Median RPKM: 87.8
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
138.7
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
135.2
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
126.4
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
117.3
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
113.6
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
113.5
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
111.1
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
107.9
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
107.3
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
106.1
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
104.7
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
104.5
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
98.3
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
96.7
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
95.7
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
95.5
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
94.5
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
93.6
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
93.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
92.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
92.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
92.1
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
91.7
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
91.3
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
90.1
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
88.6
GTEX-13O21-1926-SM-5MR39
50-59 years, male
88.5
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
88.3
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
87.8
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
86.7
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
86.3
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
85.9
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
85.5
GTEX-Y111-2626-SM-4TT24
50-59 years, male
84.5
GTEX-11P82-0926-SM-5986X
20-29 years, male
84.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
83.3
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
82.7
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
82.3
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
82.2
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
82.0
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
80.8
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
79.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
78.2
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
77.1
GTEX-13113-1526-SM-5EGHV
60-69 years, female
76.8
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
76.3
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
76.3
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
75.2
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
75.2
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
74.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
73.5
GTEX-1445S-2926-SM-5O993
60-69 years, male
71.4
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
70.8
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
69.5
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
67.6
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
67.2
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
62.7
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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