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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 147.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 527.9
Min RPKM: 168.2
Std RPKM: 77.5
Median RPKM: 281.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
527.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
497.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
495.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
490.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
480.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
462.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
443.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
439.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
432.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
429.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
428.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
427.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
424.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
424.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
420.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
416.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
413.4
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
411.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
409.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
405.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
378.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
377.3
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
353.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
346.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
344.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
339.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
338.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
337.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
332.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
331.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
329.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
329.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
328.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
328.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
326.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
323.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
322.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
322.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
321.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
317.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
313.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
311.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
309.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
303.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
302.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
301.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
296.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
294.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
294.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
294.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
293.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
293.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
291.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
289.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
289.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
287.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
282.0
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
280.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
280.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
280.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
280.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
279.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
277.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
276.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
275.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
275.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
274.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
272.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
272.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
270.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
268.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
264.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
263.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
261.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
260.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
258.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
257.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
256.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
256.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
256.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
252.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
252.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
250.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
250.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
249.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
245.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
243.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
242.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
242.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
242.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
241.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
241.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
238.4
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
237.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
236.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
233.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
232.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
232.0
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
231.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
230.7
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
227.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
224.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
223.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
222.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
220.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
212.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
210.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
209.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
208.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
207.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
207.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
185.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
184.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
168.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 317.9
Samples: 108
Max RPKM: 745.1
Min RPKM: 148.9
Std RPKM: 97.0
Median RPKM: 300.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
745.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
661.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
615.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
558.9
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
474.2
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
460.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
460.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
444.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
444.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
440.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
440.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
426.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
425.2
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
415.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
414.5
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
407.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
397.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
394.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
390.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
389.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
380.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
380.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
377.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
373.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
372.5
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
371.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
370.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
368.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
363.9
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
362.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
361.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
354.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
348.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
347.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
345.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
345.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
342.7
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
340.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
336.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
333.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
332.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
329.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
328.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
325.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
325.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
318.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
316.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
314.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
306.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
305.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
304.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
304.2
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
303.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
301.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
299.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
298.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
297.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
295.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
294.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
290.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
289.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
284.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
283.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
281.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
281.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
270.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
268.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
267.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
267.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
267.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
262.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
261.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
261.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
258.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
257.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
253.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
253.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
253.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
253.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
251.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
251.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
251.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
249.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
244.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
244.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
243.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
239.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
239.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
239.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
239.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
238.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
235.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
233.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
230.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
228.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
228.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
224.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
223.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
220.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
217.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
213.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
205.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
203.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
202.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
187.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
186.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
165.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
148.9
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.