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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 695.9
Min RPKM: 173.1
Std RPKM: 98.6
Median RPKM: 348.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
695.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
662.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
661.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
613.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
564.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
542.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
523.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
521.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
514.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
494.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
484.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
467.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
462.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
454.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
452.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
448.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
442.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
439.5
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
434.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
428.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
427.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
425.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
419.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
416.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
414.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
413.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
412.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
411.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
410.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
408.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
403.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
399.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
397.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
396.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
395.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
394.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
392.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
392.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
389.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
387.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
387.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
383.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
381.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
377.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
366.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
366.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
365.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
364.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
362.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
361.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
361.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
360.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
357.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
357.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
356.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
353.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
353.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
352.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
348.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
347.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
346.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
345.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
343.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
341.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
337.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
331.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
328.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
328.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
324.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
320.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
318.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
317.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
315.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
314.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
314.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
314.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
314.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
309.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
306.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
306.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
302.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
302.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
301.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
300.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
297.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
296.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
293.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
292.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
292.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
291.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
288.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
284.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
284.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
280.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
279.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
275.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
274.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
262.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
261.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
258.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
257.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
255.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
254.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
248.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
242.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
236.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
231.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
231.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
223.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
217.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
217.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
206.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
205.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
200.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
186.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
182.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
173.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.