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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 961.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 887.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1189.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 7541.7
Min RPKM: 615.9
Std RPKM: 780.6
Median RPKM: 1447.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
7541.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
5363.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
4200.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
3873.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
3855.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
3419.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
3405.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
3392.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
3023.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
2938.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
2904.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
2855.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
2830.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
2821.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
2784.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
2619.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
2575.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
2553.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
2527.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
2517.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
2480.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
2437.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
2419.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
2406.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
2386.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
2351.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
2325.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
2296.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
2289.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
2272.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
2261.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
2218.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
2192.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
2168.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
2085.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
2074.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
2054.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
2054.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
2048.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
2037.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
2034.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
2013.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1980.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1977.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1959.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1916.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1898.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
1882.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1882.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
1877.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1855.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1850.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1845.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
1823.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1820.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1817.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1815.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1809.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1793.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
1787.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
1781.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1773.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
1768.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1757.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1728.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1726.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
1717.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
1694.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
1681.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
1677.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1671.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1669.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1661.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1648.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1636.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
1633.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1629.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1626.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
1618.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
1617.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
1617.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
1616.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1604.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
1604.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1600.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
1597.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
1592.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
1591.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1581.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1572.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1555.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
1547.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
1538.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1524.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1507.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
1503.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1501.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
1489.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
1484.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1481.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
1475.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1464.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
1461.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
1452.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
1452.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1449.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
1448.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
1446.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
1445.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
1445.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1444.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1437.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1420.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1410.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
1408.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
1402.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
1401.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
1390.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
1376.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1375.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1370.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1357.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
1353.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
1351.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
1349.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
1343.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
1334.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1331.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
1330.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1323.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
1314.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
1311.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
1311.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
1307.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
1304.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1301.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
1300.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
1300.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
1297.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1296.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
1294.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1292.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1290.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1283.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
1273.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
1271.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
1244.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
1239.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
1239.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1239.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
1238.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1212.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
1208.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
1208.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1197.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
1192.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
1183.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
1170.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
1169.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
1167.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1156.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
1155.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
1154.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
1152.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
1144.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
1142.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
1141.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
1132.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
1122.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
1119.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
1108.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
1105.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
1104.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
1099.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
1088.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
1080.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
1071.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1066.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
1059.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
1042.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
1041.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
1024.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
1016.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
1014.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
986.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
980.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
977.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
974.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
965.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
954.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
943.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
939.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
931.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
929.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
920.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
919.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
918.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
911.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
901.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
886.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
876.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
870.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
869.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
824.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
819.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
801.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
795.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
783.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
759.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
754.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
732.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
725.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
663.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
615.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.