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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 305.3
Min RPKM: 49.7
Std RPKM: 55.6
Median RPKM: 156.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
305.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
298.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
296.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
292.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
278.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
273.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
255.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
252.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
244.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
243.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
243.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
235.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
228.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
220.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
218.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
218.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
217.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
216.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
210.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
209.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
206.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
202.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
198.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
198.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
197.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
193.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
192.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
187.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
186.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
185.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
183.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
179.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
179.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
179.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
179.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
179.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
179.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
178.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
178.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
175.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
175.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
175.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
175.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
168.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
167.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
164.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
163.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
161.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
160.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
158.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
157.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
157.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
156.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
154.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
154.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
154.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
153.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
153.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
152.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
152.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
151.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
147.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
147.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
147.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
144.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
144.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
138.9
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
136.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
135.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
132.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
132.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
131.0
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
129.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
128.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
127.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
127.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
124.8
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
122.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
121.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
121.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
120.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
119.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
118.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
116.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
114.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
113.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
112.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
110.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
110.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
109.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
105.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
101.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
99.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
89.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
88.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
86.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
84.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
83.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
82.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
70.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
60.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
59.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
52.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
49.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.