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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 155.5
Min RPKM: 56.1
Std RPKM: 20.3
Median RPKM: 89.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
155.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
143.8
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
142.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
137.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
131.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
128.4
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
126.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
124.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
124.1
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
121.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
120.6
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
119.8
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
119.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
115.5
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
110.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
109.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
108.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
108.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
108.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
108.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
108.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
108.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
106.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
103.9
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
101.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
100.6
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
99.7
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
99.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
99.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
98.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
98.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
97.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
97.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
96.8
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
96.7
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
96.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
95.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
95.1
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
94.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
93.9
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
91.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
91.7
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
91.6
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
91.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
91.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
90.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
89.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
89.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
88.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
88.7
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
88.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
88.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
86.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
85.5
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
85.4
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
85.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
85.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
84.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
84.7
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
83.9
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
83.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
83.4
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
82.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
82.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
81.8
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
81.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
80.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
79.0
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
78.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
78.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
78.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
77.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
77.5
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
77.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
76.8
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
75.3
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
75.0
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
74.2
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
73.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
73.1
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
72.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
71.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
69.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
68.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
68.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
68.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
68.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
67.2
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
67.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
66.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
66.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
64.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
61.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
61.5
GTEX-11I78-2026-SM-5987C
50-59 years, female
60.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
56.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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