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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 114.4
Min RPKM: 56.7
Std RPKM: 13.2
Median RPKM: 78.9
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
114.4
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
114.2
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
107.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
105.7
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
100.1
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
99.3
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
97.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
97.4
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
95.9
GTEX-Y111-2626-SM-4TT24
50-59 years, male
95.6
GTEX-X261-2426-SM-4PQZU
50-59 years, male
95.1
GTEX-11P82-0926-SM-5986X
20-29 years, male
93.0
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
91.9
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
91.0
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
89.0
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
88.8
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
86.9
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
86.0
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
85.6
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
85.3
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
85.1
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
84.3
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
83.7
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
83.6
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
83.2
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
82.1
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
80.3
GTEX-13113-1526-SM-5EGHV
60-69 years, female
79.8
GTEX-1445S-2926-SM-5O993
60-69 years, male
78.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
78.7
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
77.9
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
77.8
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
76.0
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
75.3
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
74.8
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
74.7
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
74.4
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
72.8
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
72.1
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
72.0
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
71.3
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
71.2
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
70.2
GTEX-13O21-1926-SM-5MR39
50-59 years, male
70.2
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
69.6
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
69.1
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
69.0
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
68.9
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
68.3
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
67.9
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
67.8
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
67.8
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
66.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
66.4
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
65.7
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
57.4
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
56.7
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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