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COLON - Expression summary
RNA expressioni
HPA:230.3TPM
GTEx:88.7RPKM
FANTOM5:558.6Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 230.3
overview Male, age 54 Sample 1
TPM: 302.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 234.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 215.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 201.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 248.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 312.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 256.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 168.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 212.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 207.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 193.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 239.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 200.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 88.7
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 94.6
Samples: 149

Max RPKM: 134.5
Min RPKM: 47.4
Std RPKM: 18.0
Median RPKM: 93.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 134.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 134.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 133.0
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 132.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 131.7
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 129.0
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 127.8
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 125.8
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 125.7
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 124.9
Show all
Colon - Transverse
RPKM: 84.3
Samples: 196

Max RPKM: 160.3
Min RPKM: 48.1
Std RPKM: 19.7
Median RPKM: 81.3
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 160.3
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 141.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 132.0
GTEX-Q734-1126-SM-48TZY 40-49 years, female 130.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 129.2
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 127.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 124.3
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 124.0
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 123.7
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 122.6
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 558.6
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 540.7
FF:10014-101C5 62,83,84 years, mixed 558.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.