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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 284.0
Min RPKM: 10.5
Std RPKM: 58.9
Median RPKM: 86.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
284.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
256.3
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
250.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
242.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
220.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
219.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
192.5
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
192.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
187.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
181.7
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
179.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
177.1
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
174.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
169.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
168.5
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
165.9
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
163.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
143.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
131.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
130.4
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
129.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
128.7
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
127.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
125.9
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
122.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
116.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
116.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
114.2
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
111.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
111.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
110.4
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
107.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
107.2
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
106.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
106.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
105.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
103.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
103.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
103.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
97.5
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
97.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
94.3
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
93.7
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
92.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
90.5
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
90.2
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
87.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
86.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
86.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
85.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
85.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
83.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
82.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
78.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
78.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
76.5
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
76.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
75.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
75.1
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
73.7
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
72.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
70.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
64.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
62.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
61.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
60.8
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
59.1
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
57.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
56.2
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
56.1
GTEX-S341-1226-SM-4AD5S
40-49 years, female
55.8
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
52.4
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
51.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
50.8
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
50.5
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
49.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
49.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
48.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
45.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
44.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
42.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
40.5
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
35.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
35.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
34.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
32.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
31.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
30.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
30.7
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
30.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
27.4
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
25.4
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
23.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
17.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
13.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
10.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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