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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 173.3
Min RPKM: 7.6
Std RPKM: 40.6
Median RPKM: 72.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
173.3
GTEX-1445S-2926-SM-5O993
60-69 years, male
153.4
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
145.8
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
137.9
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
121.9
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
116.7
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
113.9
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
113.7
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
111.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
110.6
GTEX-13O21-1926-SM-5MR39
50-59 years, male
110.0
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
106.4
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
100.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
96.9
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
95.9
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
95.2
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
94.3
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
93.1
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
91.5
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
91.3
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
88.2
GTEX-13113-1526-SM-5EGHV
60-69 years, female
87.5
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
84.0
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
83.7
GTEX-11P82-0926-SM-5986X
20-29 years, male
81.1
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
76.8
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
73.7
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
72.6
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
72.6
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
71.0
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
70.3
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
67.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
64.4
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
63.3
GTEX-X261-2426-SM-4PQZU
50-59 years, male
57.7
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
53.3
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
50.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
48.7
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
43.9
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
41.1
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
38.8
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
37.4
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
32.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
29.0
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
28.5
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
28.0
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
24.3
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
23.8
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
22.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
15.6
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
15.5
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
14.9
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
14.0
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
11.5
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
9.4
GTEX-Y111-2626-SM-4TT24
50-59 years, male
8.6
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
7.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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