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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 40
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 13.4
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 8.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 4.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 22.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 31.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 5.7
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 9.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 344.9
Min RPKM: 11.1
Std RPKM: 51.8
Median RPKM: 56.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
344.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
214.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
211.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
189.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
183.0
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
170.8
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
170.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
169.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
162.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
151.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
150.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
139.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
138.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
132.7
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
132.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
131.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
120.5
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
119.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
118.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
117.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
115.9
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
115.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
112.1
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
111.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
109.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
102.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
101.9
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
98.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
93.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
92.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
91.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
90.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
88.6
GTEX-QEL4-1226-SM-447A4
50-59 years, male
88.6
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
87.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
85.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
85.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
81.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
79.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
77.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
77.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
74.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
73.9
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
73.9
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
72.9
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
71.2
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
70.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
68.8
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
67.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
66.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
65.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
64.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
64.1
GTEX-Q734-0326-SM-48U15
40-49 years, female
63.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
62.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
59.7
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
59.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
57.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
56.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
56.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
55.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
55.0
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
54.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
54.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
51.8
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
49.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
49.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
47.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
46.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
46.3
GTEX-13113-1326-SM-5GCOI
60-69 years, female
45.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
45.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
45.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
45.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
44.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
43.5
GTEX-RN64-1826-SM-48FDV
50-59 years, male
43.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
42.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
42.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
42.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
41.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
40.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
40.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
39.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
38.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
38.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
38.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
38.3
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
36.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
36.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
36.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
36.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
35.5
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
33.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
33.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
32.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
32.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
32.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
30.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
29.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
29.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
28.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
28.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
28.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
26.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
26.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
26.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
26.0
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
23.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
22.3
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
21.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
21.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
20.2
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
18.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
18.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
17.6
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
14.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
13.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
11.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
