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COLON - Expression summary
RNA expressioni
HPA:21.1TPM
GTEx:82.5RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 21.1
overview Male, age 54 Sample 1
TPM: 60
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 36.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 46.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 45.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 82.5
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 103.3
Samples: 149

Max RPKM: 358.2
Min RPKM: 5.6
Std RPKM: 71.1
Median RPKM: 84.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 358.2
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 284.9
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 266.9
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 263.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 261.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 260.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 255.4
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 251.1
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 250.8
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 250.3
Show all
Colon - Transverse
RPKM: 66.7
Samples: 196

Max RPKM: 517.6
Min RPKM: 8.3
Std RPKM: 60.2
Median RPKM: 43.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 517.6
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 299.7
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 268.3
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 260.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 235.0
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 210.7
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 196.4
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 182.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 178.1
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 168.6
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 0.0
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.