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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 735.3
Min RPKM: 92.1
Std RPKM: 139.2
Median RPKM: 281.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
735.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
716.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
695.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
673.0
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
652.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
573.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
572.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
554.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
537.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
534.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
531.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
491.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
463.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
458.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
452.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
451.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
448.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
432.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
425.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
423.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
418.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
417.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
417.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
410.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
408.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
407.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
406.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
404.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
399.8
GTEX-QLQW-0126-SM-447BK
30-39 years, male
391.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
389.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
386.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
381.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
380.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
366.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
361.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
352.3
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
349.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
344.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
339.0
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
337.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
336.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
333.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
331.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
317.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
309.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
298.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
297.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
296.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
292.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
284.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
282.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
280.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
278.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
277.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
270.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
270.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
264.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
263.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
263.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
261.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
260.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
257.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
255.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
255.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
252.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
247.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
245.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
244.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
233.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
231.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
229.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
229.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
227.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
224.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
221.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
221.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
218.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
216.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
215.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
214.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
212.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
207.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
205.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
205.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
204.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
203.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
196.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
178.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
174.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
174.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
171.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
169.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
159.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
156.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
155.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
150.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
149.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
148.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
143.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
141.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
128.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
122.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
92.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.