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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 24.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 4.3
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 4.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 17.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 14.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 44.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 13.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 25.7
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 135.9
Min RPKM: 9.9
Std RPKM: 28.2
Median RPKM: 62.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
135.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
129.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
129.5
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
119.9
GTEX-S33H-1626-SM-4AD68
30-39 years, male
116.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
109.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
107.9
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
104.7
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
104.6
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
104.5
GTEX-RN64-1826-SM-48FDV
50-59 years, male
104.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
101.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
99.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
97.7
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
97.6
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
96.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
95.5
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
94.6
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
94.1
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
93.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
93.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
87.9
GTEX-11GSP-0626-SM-5986T
60-69 years, female
86.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
86.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
82.4
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
81.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
80.5
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
80.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
80.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
79.8
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
79.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
78.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
77.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
76.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
76.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
74.4
GTEX-X261-1726-SM-4PQYT
50-59 years, male
73.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
72.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
72.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
72.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
72.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
71.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
70.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
70.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
70.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
70.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
69.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
68.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
67.9
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
66.5
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
65.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
65.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
64.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
64.2
GTEX-QESD-2026-SM-447BI
20-29 years, male
63.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
62.7
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
62.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
62.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
62.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
62.3
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
61.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
60.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
58.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
57.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
56.6
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
56.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
55.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
53.3
GTEX-R53T-0326-SM-48FEC
50-59 years, female
52.8
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
52.5
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
52.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
51.6
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
51.4
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
50.9
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
50.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
48.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
48.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
48.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
47.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
47.5
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
45.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
44.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
44.0
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
43.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
43.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
43.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
43.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
43.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
42.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
40.6
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
38.5
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
37.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
36.9
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
36.6
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
35.6
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
35.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
34.9
GTEX-QEL4-1226-SM-447A4
50-59 years, male
33.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
33.2
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
32.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
32.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
31.2
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
30.2
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
30.2
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
26.9
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
26.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
26.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
25.0
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
23.8
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
23.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
22.3
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
22.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
17.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
14.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
14.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
14.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
14.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
11.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
9.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
