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COLON - Expression summary
RNA expressioni
HPA:33.1TPM
GTEx:14.9RPKM
FANTOM5:159.0Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 33.1
overview Male, age 54 Sample 1
TPM: 65.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 41.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 35.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 20.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 28.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 38.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 25.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 27.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 38.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 39.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 26.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 14.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 12.0
Samples: 149

Max RPKM: 23.3
Min RPKM: 2.3
Std RPKM: 3.8
Median RPKM: 11.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 23.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 23.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 21.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 21.4
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 20.8
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 20.6
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 20.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 19.5
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 18.8
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 18.7
Show all
Colon - Transverse
RPKM: 17.1
Samples: 196

Max RPKM: 37.6
Min RPKM: 1.9
Std RPKM: 6.0
Median RPKM: 16.5
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 37.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 33.2
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 33.1
GTEX-Q734-1126-SM-48TZY 40-49 years, female 31.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 30.3
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 29.9
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 29.7
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 29.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 29.3
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 28.4
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 159.0
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 160.8
FF:10014-101C5 62,83,84 years, mixed 159.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.