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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 506.4
Min RPKM: 161.9
Std RPKM: 78.6
Median RPKM: 298.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
506.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
476.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
470.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
469.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
464.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
455.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
448.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
448.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
441.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
416.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
413.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
411.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
400.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
399.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
399.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
398.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
396.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
392.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
391.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
390.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
388.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
384.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
379.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
379.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
378.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
377.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
370.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
363.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
355.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
349.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
347.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
345.1
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
344.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
343.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
340.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
337.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
335.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
334.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
334.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
333.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
332.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
332.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
327.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
320.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
315.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
308.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
306.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
305.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
301.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
301.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
300.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
298.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
297.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
293.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
289.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
288.6
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
285.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
284.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
283.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
282.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
281.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
281.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
281.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
280.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
279.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
277.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
277.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
276.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
275.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
273.4
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
273.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
271.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
265.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
265.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
263.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
253.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
253.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
252.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
245.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
244.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
242.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
240.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
239.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
239.1
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
238.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
238.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
237.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
234.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
233.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
232.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
226.2
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
226.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
216.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
215.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
207.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
203.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
199.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
190.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
186.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
184.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
179.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
178.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
163.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
161.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.