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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2804.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2334.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3794.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 926.1
Min RPKM: 43.3
Std RPKM: 92.3
Median RPKM: 195.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
926.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
572.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
549.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
507.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
490.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
462.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
427.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
424.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
384.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
359.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
351.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
348.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
343.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
341.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
332.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
331.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
326.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
325.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
324.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
322.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
322.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
321.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
320.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
315.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
311.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
294.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
287.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
287.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
283.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
282.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
279.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
279.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
278.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
277.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
276.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
275.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
274.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
274.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
273.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
270.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
270.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
268.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
268.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
263.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
257.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
256.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
252.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
252.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
250.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
250.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
247.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
245.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
242.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
240.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
240.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
240.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
240.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
239.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
236.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
235.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
233.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
232.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
232.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
232.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
231.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
231.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
231.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
230.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
227.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
226.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
225.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
224.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
223.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
223.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
222.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
222.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
221.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
220.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
218.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
215.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
215.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
215.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
213.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
212.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
211.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
210.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
209.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
209.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
208.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
208.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
206.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
205.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
205.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
205.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
203.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
202.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
202.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
202.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
201.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
201.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
199.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
199.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
198.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
198.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
198.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
197.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
196.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
195.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
195.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
194.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
194.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
193.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
192.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
192.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
191.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
190.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
190.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
188.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
188.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
188.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
187.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
187.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
187.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
187.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
186.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
186.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
185.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
185.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
184.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
184.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
183.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
183.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
183.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
183.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
182.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
182.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
182.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
182.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
182.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
181.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
181.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
180.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
180.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
179.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
179.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
178.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
178.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
177.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
176.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
176.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
172.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
171.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
171.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
170.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
170.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
169.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
169.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
169.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
169.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
169.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
168.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
168.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
164.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
164.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
162.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
162.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
161.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
161.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
159.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
159.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
159.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
157.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
157.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
156.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
156.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
152.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
152.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
151.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
151.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
148.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
147.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
147.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
146.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
144.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
144.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
138.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
138.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
138.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
137.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
136.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
135.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
131.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
130.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
130.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
130.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
130.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
126.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
125.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
125.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
122.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
121.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
119.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
118.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
117.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
117.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
115.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
113.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
112.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
112.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
102.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
93.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
93.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
88.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
43.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.