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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 207.3
Min RPKM: 27.4
Std RPKM: 41.6
Median RPKM: 116.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
207.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
191.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
185.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
185.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
184.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
184.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
180.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
175.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
175.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
174.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
171.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
170.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
165.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
164.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
164.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
163.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
162.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
161.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
158.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
153.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
152.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
148.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
148.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
148.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
144.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
144.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
144.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
144.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
143.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
142.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
142.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
142.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
142.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
141.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
140.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
140.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
137.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
136.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
134.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
134.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
133.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
133.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
132.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
131.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
129.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
127.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
127.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
126.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
126.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
125.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
125.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
124.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
124.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
121.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
120.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
118.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
117.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
117.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
116.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
114.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
114.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
112.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
110.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
109.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
109.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
107.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
107.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
106.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
105.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
103.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
102.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
101.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
101.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
101.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
98.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
97.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
96.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
95.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
95.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
93.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
93.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
91.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
91.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
86.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
86.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
84.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
81.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
79.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
79.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
76.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
75.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
73.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
70.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
70.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
69.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
68.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
66.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
65.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
62.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
62.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
56.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
56.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
56.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
55.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
54.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
53.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
53.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
52.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
50.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
48.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
47.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
45.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
43.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
42.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
38.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
32.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
27.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.