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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 120.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 53.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 42.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 94.3
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 101.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 164.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 100
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 126
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 150.6
Min RPKM: 10.0
Std RPKM: 25.1
Median RPKM: 65.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
150.6
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
115.1
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
115.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
113.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
100.5
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
100.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
93.8
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
93.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
91.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
91.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
91.1
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
90.8
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
89.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
88.5
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
87.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
86.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
86.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
86.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
86.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
85.9
GTEX-QESD-2026-SM-447BI
20-29 years, male
85.5
GTEX-YECK-1926-SM-4W21H
60-69 years, male
84.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
83.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
83.1
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
82.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
82.2
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
81.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
79.5
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
79.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
78.1
GTEX-RU72-1426-SM-46MUF
50-59 years, female
77.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
77.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
77.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
77.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
76.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
76.3
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
76.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
74.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
74.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
73.5
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
71.9
GTEX-13112-1426-SM-5EGH8
50-59 years, male
71.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
71.3
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
71.3
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
71.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
70.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
69.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
69.2
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
68.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
68.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
68.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
68.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
67.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
67.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
67.2
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
66.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
66.8
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
66.5
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
65.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
65.0
GTEX-12696-0826-SM-5EGGE
60-69 years, male
64.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
64.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
63.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
63.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
63.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
62.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
61.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
60.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
60.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
59.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
59.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
58.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
57.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
56.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
56.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
54.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
53.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
52.9
GTEX-S33H-1626-SM-4AD68
30-39 years, male
51.3
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
51.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
50.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
49.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
48.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
48.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
48.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
46.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
45.1
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
44.3
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
43.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
42.3
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
42.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
41.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
41.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
40.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
36.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
35.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
34.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
34.3
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
32.9
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
32.6
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
32.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
30.9
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
30.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
29.4
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
28.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
28.1
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
27.2
GTEX-QEL4-1226-SM-447A4
50-59 years, male
26.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
25.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
25.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
25.0
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
22.1
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
19.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
18.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
17.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
17.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
13.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
12.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
10.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
