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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 146
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 19.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 7.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 631.3
Min RPKM: 10.7
Std RPKM: 94.9
Median RPKM: 108.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
631.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
490.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
408.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
404.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
364.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
347.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
333.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
324.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
317.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
316.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
316.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
311.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
302.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
300.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
298.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
291.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
285.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
285.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
278.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
274.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
267.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
266.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
255.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
255.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
255.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
253.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
251.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
251.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
250.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
249.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
248.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
246.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
242.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
242.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
237.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
235.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
234.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
228.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
225.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
225.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
221.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
213.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
211.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
207.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
203.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
202.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
199.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
197.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
197.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
193.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
191.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
187.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
186.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
185.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
183.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
180.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
180.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
177.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
177.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
172.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
167.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
167.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
166.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
164.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
164.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
163.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
157.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
157.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
154.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
153.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
148.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
146.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
144.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
144.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
144.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
143.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
137.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
136.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
136.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
136.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
134.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
133.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
131.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
129.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
128.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
128.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
126.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
126.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
125.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
124.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
124.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
123.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
122.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
122.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
119.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
117.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
117.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
116.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
116.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
115.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
115.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
114.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
112.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
112.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
112.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
109.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
108.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
107.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
106.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
105.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
104.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
104.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
103.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
102.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
101.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
101.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
101.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
100.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
99.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
98.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
96.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
96.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
94.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
93.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
92.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
91.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
91.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
91.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
91.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
90.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
90.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
90.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
90.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
88.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
88.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
87.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
87.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
85.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
85.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
84.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
83.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
80.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
78.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
77.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
76.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
76.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
75.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
74.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
72.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
72.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
71.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
71.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
70.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
69.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
69.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
69.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
68.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
68.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
66.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
65.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
64.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
62.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
62.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
60.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
60.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
59.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
59.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
57.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
56.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
56.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
56.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
56.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
56.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
55.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
54.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
54.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
53.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
52.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
52.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
51.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
51.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
51.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
51.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
50.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
49.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
49.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
48.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
47.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
45.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
45.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
44.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
43.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
42.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
42.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
42.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
42.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
41.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
40.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
40.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
39.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
38.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
34.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
34.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
34.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
32.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
30.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
30.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
29.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
28.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
23.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
21.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
19.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
15.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
10.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.