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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 8497.9
Min RPKM: 278.3
Std RPKM: 1680.6
Median RPKM: 3116.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
8497.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
7539.0
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
6869.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
6600.4
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
6540.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
6194.6
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
6170.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
6122.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
5720.5
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
5444.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
5204.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
5183.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
5136.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
5067.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
4927.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
4926.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
4925.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
4908.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
4812.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
4805.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
4737.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
4728.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
4661.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
4655.9
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
4638.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
4582.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
4483.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
4446.7
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
4412.8
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
4343.1
GTEX-11I78-2026-SM-5987C
50-59 years, female
4284.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
4157.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
4087.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
4034.2
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
3845.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
3805.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
3779.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
3754.3
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
3747.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
3694.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
3661.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
3619.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
3554.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
3360.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
3339.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
3308.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
3238.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
3188.1
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
3045.1
GTEX-S341-1226-SM-4AD5S
40-49 years, female
3018.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
3011.5
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
2972.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
2952.3
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
2952.0
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
2882.4
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
2867.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
2771.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
2669.6
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
2669.3
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
2653.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
2615.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
2588.3
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
2516.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
2436.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
2379.5
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
2360.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
2354.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
2205.4
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
2147.4
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
2090.9
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
1996.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
1940.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
1889.1
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
1879.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
1820.7
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
1778.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
1751.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
1744.2
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
1728.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
1634.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
1580.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
1579.7
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
1571.8
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
1553.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
1503.7
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
1463.9
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
1323.7
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
1301.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
1300.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
1232.4
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
1223.7
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
925.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
702.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
692.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
656.5
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
278.3
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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