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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 14885.1
Min RPKM: 827.4
Std RPKM: 2631.6
Median RPKM: 8146.8
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
14885.1
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
13950.3
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
13745.4
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
12965.9
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
12352.8
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
12278.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
12187.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
11191.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
11152.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
11032.3
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
10858.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
10665.8
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
10543.7
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
10431.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
10400.6
GTEX-13113-1226-SM-5EGHT
60-69 years, female
10363.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
9887.8
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
9829.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
9808.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
9746.3
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
9648.0
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
9612.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
9438.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
9418.7
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
9411.7
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
9369.8
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
9291.6
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
9210.7
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
9190.9
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
9159.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
9139.5
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
9009.7
GTEX-1122O-1326-SM-5H11F
60-69 years, female
8910.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
8855.9
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
8799.7
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
8767.1
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
8757.3
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
8664.9
GTEX-ZTSS-0926-SM-59865
40-49 years, male
8567.0
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
8518.3
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
8502.2
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
8399.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
8392.3
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
8183.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
8110.3
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
7783.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
7624.1
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
7574.8
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
7529.6
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
7465.8
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
7423.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
7380.2
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
7279.8
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
7262.3
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
6954.5
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
6914.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
6746.0
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
6592.1
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
6575.3
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
6540.3
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
6526.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
6476.4
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
6463.1
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
6394.5
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
6296.0
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
6237.5
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
6109.2
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
6018.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
5998.8
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
5876.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
5874.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
5835.0
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
5811.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
5810.4
GTEX-117YX-0326-SM-5GICL
50-59 years, male
5753.7
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
5661.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
5173.2
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
5051.9
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
5003.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
4934.0
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
4926.6
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
4542.3
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
4230.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
4098.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
3120.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
2062.2
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
1970.5
GTEX-1192X-2526-SM-59868
50-59 years, male
827.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
