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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 9259.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 19086
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 38179.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 14272
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 13726.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 19669.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 18639
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 6602.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 52271.8
Min RPKM: 699.8
Std RPKM: 8009.4
Median RPKM: 12468.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
52271.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
31140.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
30327.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
29114.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
27368.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
26774.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
26757.7
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
26171.9
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
24898.2
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
24865.5
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
24653.2
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
23929.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
23802.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
23779.8
GTEX-X261-1726-SM-4PQYT
50-59 years, male
23556.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
23513.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
23402.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
23319.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
23006.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
22854.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
22526.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
21959.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
21720.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
21435.8
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
21349.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
21154.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
21074.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
20688.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
20572.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
20043.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
19082.6
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
18743.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
18701.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
18033.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
17998.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
17330.6
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
16964.8
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
16954.6
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
16930.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
16853.3
GTEX-RN64-1826-SM-48FDV
50-59 years, male
16831.5
GTEX-RU72-1426-SM-46MUF
50-59 years, female
16713.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
16711.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
16147.3
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
16040.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
15950.4
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
15182.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
14937.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
14920.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
14689.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
14578.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
13940.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
13682.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
13604.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
13574.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
13498.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
13228.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
12990.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
12979.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
12468.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
12222.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
11886.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
11874.0
GTEX-1399T-0826-SM-5IFES
60-69 years, male
11730.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
11526.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
10938.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
10914.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
10543.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
10205.2
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
9656.0
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
9468.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
9441.2
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
9334.0
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
9186.2
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
9068.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
8845.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
8561.7
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
8419.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
8227.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
7945.9
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
7923.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
7767.6
GTEX-Q734-0326-SM-48U15
40-49 years, female
7626.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
7463.3
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
7460.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
7240.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
7225.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
7210.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
7111.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
7030.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
7000.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
6974.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
6967.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
6911.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
6880.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
6879.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
6837.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
6747.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
6693.9
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
6516.8
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
6493.5
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
6466.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
6105.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
6038.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
5964.3
GTEX-S32W-1926-SM-4AD63
50-59 years, female
5709.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
5667.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
5595.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
5489.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
5457.2
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
5218.4
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
4921.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
4878.0
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
4841.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
4765.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
4694.9
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
3819.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
3656.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
699.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
