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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1536.1
Min RPKM: 96.0
Std RPKM: 321.4
Median RPKM: 344.1
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
1536.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
1335.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
1237.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
1199.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
1183.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
1122.3
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
1109.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
1035.4
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
1010.6
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
985.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
954.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
907.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
872.3
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
857.0
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
791.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
791.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
783.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
767.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
731.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
688.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
663.3
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
633.1
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
632.9
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
619.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
591.8
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
583.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
549.6
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
540.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
540.6
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
530.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
525.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
508.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
498.5
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
490.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
479.5
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
444.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
435.4
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
426.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
415.4
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
405.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
391.2
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
386.3
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
383.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
375.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
366.2
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
363.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
358.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
347.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
340.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
337.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
325.3
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
322.1
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
319.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
308.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
303.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
286.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
284.7
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
284.7
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
277.1
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
276.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
275.0
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
274.7
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
267.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
265.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
257.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
249.8
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
246.2
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
242.5
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
241.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
235.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
228.4
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
226.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
226.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
221.4
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
217.9
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
215.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
208.8
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
203.9
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
199.1
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
196.6
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
190.3
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
174.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
166.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
158.8
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
158.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
155.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
154.6
GTEX-QCQG-1226-SM-48U23
50-59 years, female
142.7
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
142.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
136.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
136.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
116.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
114.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
99.1
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
98.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
96.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.