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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 530.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 43.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 113.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 7816.8
Min RPKM: 36.9
Std RPKM: 1465.1
Median RPKM: 1217.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
7816.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
6624.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
6555.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
5992.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
5729.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
5534.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
5112.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
5083.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
5062.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
5057.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
4932.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
4860.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
4597.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
4462.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
4073.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
4039.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
4019.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
4000.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
3982.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
3828.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
3779.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
3647.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
3635.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
3610.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
3287.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
3270.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
3264.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
3146.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
3103.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
3097.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
3090.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
3066.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
2863.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
2860.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
2830.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
2819.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
2815.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
2805.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
2655.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
2635.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
2634.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
2627.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
2598.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
2570.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
2527.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
2490.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
2481.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
2471.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
2458.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
2424.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
2396.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
2383.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
2372.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
2306.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
2271.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
2251.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
2250.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
2228.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
2168.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
2156.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
2111.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
2104.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
2099.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
2055.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
2038.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
2036.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
2033.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
2017.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
2016.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1990.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1990.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1986.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
1892.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
1870.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
1797.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1795.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
1794.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1763.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
1757.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
1729.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1709.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1686.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
1665.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1662.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1614.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
1587.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
1578.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1564.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1503.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
1502.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
1498.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
1482.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1413.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1397.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1392.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1381.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
1369.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1364.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
1345.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
1330.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1324.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
1252.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1249.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
1244.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1241.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1238.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
1218.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1215.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
1214.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
1171.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1130.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1125.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
1124.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1109.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
1102.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1057.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
1048.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1048.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1026.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1026.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1020.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
971.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
969.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
960.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
951.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
924.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
923.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
917.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
902.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
874.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
854.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
825.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
807.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
800.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
793.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
789.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
782.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
779.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
715.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
676.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
670.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
668.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
666.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
659.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
648.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
643.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
642.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
638.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
629.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
624.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
609.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
602.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
585.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
575.8
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
566.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
553.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
550.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
518.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
486.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
471.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
468.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
463.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
459.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
448.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
439.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
434.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
431.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
423.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
407.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
405.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
404.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
396.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
363.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
352.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
351.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
343.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
330.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
329.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
316.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
316.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
300.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
300.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
294.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
294.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
269.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
264.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
262.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
255.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
251.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
251.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
251.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
250.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
237.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
205.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
187.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
180.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
176.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
174.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
171.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
169.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
161.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
136.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
125.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
120.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
115.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
112.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
109.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
109.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
99.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
98.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
97.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
55.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
41.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
36.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.