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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 378.8
Min RPKM: 77.4
Std RPKM: 72.6
Median RPKM: 156.6
GTEX-13113-1526-SM-5EGHV
60-69 years, female
378.8
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
364.0
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
361.7
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
341.0
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
307.2
GTEX-1445S-2926-SM-5O993
60-69 years, male
284.4
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
264.5
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
253.4
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
248.7
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
247.9
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
231.2
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
231.0
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
228.8
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
218.3
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
214.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
213.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
211.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
209.7
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
208.1
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
199.8
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
199.5
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
185.8
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
179.7
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
176.2
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
172.6
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
169.1
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
159.2
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
157.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
156.6
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
155.4
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
148.0
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
145.1
GTEX-11P82-0926-SM-5986X
20-29 years, male
144.3
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
142.8
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
139.7
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
138.2
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
137.3
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
135.0
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
134.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
132.1
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
131.9
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
131.8
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
130.7
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
124.9
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
123.8
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
122.6
GTEX-Y111-2626-SM-4TT24
50-59 years, male
116.8
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
111.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
108.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
108.7
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
108.4
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
106.0
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
103.2
GTEX-X261-2426-SM-4PQZU
50-59 years, male
99.3
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
91.5
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
85.0
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
77.4
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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