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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 2.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 4.4
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 58.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 12.1
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 191.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 0.3
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 0.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 95.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1026.6
Min RPKM: 23.8
Std RPKM: 103.1
Median RPKM: 99.8
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
1026.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
505.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
255.8
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
254.2
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
217.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
211.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
211.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
203.8
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
203.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
200.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
191.9
GTEX-S32W-1926-SM-4AD63
50-59 years, female
191.6
GTEX-QEL4-1226-SM-447A4
50-59 years, male
184.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
183.2
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
179.2
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
179.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
176.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
175.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
168.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
166.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
163.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
160.9
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
154.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
148.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
143.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
141.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
140.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
138.1
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
137.7
GTEX-REY6-1226-SM-48FDR
60-69 years, male
135.7
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
135.0
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
129.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
127.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
126.0
GTEX-R53T-0326-SM-48FEC
50-59 years, female
123.4
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
121.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
120.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
120.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
118.6
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
115.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
114.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
113.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
112.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
111.0
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
110.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
108.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
107.5
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
107.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
106.6
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
106.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
104.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
104.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
104.2
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
104.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
103.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
102.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
100.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
100.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
99.8
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
99.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
97.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
96.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
96.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
96.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
96.0
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
94.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
92.5
GTEX-1399T-0826-SM-5IFES
60-69 years, male
92.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
90.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
90.6
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
90.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
89.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
88.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
88.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
87.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
82.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
82.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
82.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
81.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
79.4
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
76.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
75.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
75.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
73.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
73.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
73.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
73.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
73.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
72.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
71.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
69.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
68.5
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
68.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
65.7
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
65.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
64.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
63.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
63.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
62.9
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
61.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
61.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
58.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
58.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
57.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
57.0
GTEX-13112-1426-SM-5EGH8
50-59 years, male
56.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
55.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
53.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
53.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
52.5
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
51.5
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
50.1
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
48.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
48.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
44.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
41.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
41.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
30.3
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
23.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
