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HLA-A
COLON - Expression summary
RNA expressioni
HPA:146.1TPM
GTEx:281.8RPKM
FANTOM5:1020.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 146.1
overview Male, age 54 Sample 1
TPM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 46.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 689.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 620.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 487
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 32.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 281.8
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 174.8
Samples: 149

Max RPKM: 414.5
Min RPKM: 43.1
Std RPKM: 69.7
Median RPKM: 166.9
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 414.5
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 397.1
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 395.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 367.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 358.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 344.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 325.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 310.7
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 306.9
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 297.5
Show all
Colon - Transverse
RPKM: 363.2
Samples: 196

Max RPKM: 1189.6
Min RPKM: 83.0
Std RPKM: 186.1
Median RPKM: 338.9
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 1189.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 908.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 866.5
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 838.2
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 836.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 805.3
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 793.6
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 791.8
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 786.5
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 744.4
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 1020.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 774.0
FF:10014-101C5 62,83,84 years, mixed 1020.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.